Gene CPS_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0904 
Symbol 
ID3522571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp904523 
End bp905437 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content40% 
IMG OID637283369 
Producthypothetical protein 
Protein accessionYP_267653 
Protein GI71282099 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATA AAGTAGTGAA TAATGATAAA ATCTCCTCTG TAGGTATCAT TGGCTGTGGT 
TGGTTGGGTA GCGCATTAGC CTATCAGCTG AAAAATCAGG ATATAGCAGT CCTTGCGACG
CGAAGCAATA TAGATAATAT CGAACAATTG AAAAGCCAAG GTATAGAAGC TGAAGTATTA
TCTTTACCAG CAGAACAAGC GCAGTTAAAT ACCCACCCCA TTTTTAAGCA GCAATGTTTA
GTTATCGCCA TTACGCCACA ATTTAGGCAG GGTCGTGTTG ATTATGCGGA TAAAGTACAA
CAGCTAGTTG AGTCAGCTAA AGTCGGCAAT TGTGTCGAAC AGATTATTTT ACTGAGCAGC
AGTGCGATAT ATAACGGCTT ATCAGGAGAC GTTGAGGAAA ACAGCATTTT AGATATGTCG
GCTGATAAAG TTTCGGTATT AAATCAAGCT GAGCAAGCGG TATTAAGCTT TAATCACCCT
GGCCGAAATG AGTCTCGCTT AAATGCGTTA AATGCTGAAG TAGGCAATAA GAAAGCTTAT
GTGCTCAGGT TATCTGGTTT AGTGGGACCA AAGCGTCATC CTGGCAAGTT TTTGCTAAAT
GGTCATATGC TAAAAAGCCC CCAAGCAATT GTTAACTTAA TTCATCAGCA AGATGCCGTT
GGTCTCATTC AGACATTATT ACAAAGTGCT AACTGCGGGG GAATTTTTAA TGGTGTGAGT
TCAACTAAAG TCACAAAAAA GCAATATTAC CAAGCTGCAG CAAGTGCTTT ACAATTACCA
ACGCCTACGT TTGAAGAGAT CGAACTATCA GAAGATAATG CGCCCAAGGT AGTATCGGGC
AAGAAAACTC AGGCAGAGTT AGCTTATGAA TTTGTTTATG ACGATTTACT TGCTTGGCTT
GAGTTAGCAG TGTAG
 
Protein sequence
MTNKVVNNDK ISSVGIIGCG WLGSALAYQL KNQDIAVLAT RSNIDNIEQL KSQGIEAEVL 
SLPAEQAQLN THPIFKQQCL VIAITPQFRQ GRVDYADKVQ QLVESAKVGN CVEQIILLSS
SAIYNGLSGD VEENSILDMS ADKVSVLNQA EQAVLSFNHP GRNESRLNAL NAEVGNKKAY
VLRLSGLVGP KRHPGKFLLN GHMLKSPQAI VNLIHQQDAV GLIQTLLQSA NCGGIFNGVS
STKVTKKQYY QAAASALQLP TPTFEEIELS EDNAPKVVSG KKTQAELAYE FVYDDLLAWL
ELAV