Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0887 |
Symbol | |
ID | 3519271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 894216 |
End bp | 895649 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283352 |
Product | putative phage replication initiation protein |
Protein accession | YP_267636 |
Protein GI | 71279225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2946] Putative phage replication protein RstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0553548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTA AACCAACAAC AATCCCTTGT TTAGTGGATG CCTTGTCACT GACTTGGTCA CCCAAAGAAT TATTAAACAT TAAGCAGATG GCCAAAATTG GCGCCTGTAT CAAAAGCGAA TTAATTGTTA AGGCAAAAGA TGCGGCGTTA AACCGTGAAC TGGCCAAGCT TGAGAACACA AAAAACAAAG AGCTGTTAGG CACTAACGCG TTTAACGCGC ATGAATATGA AGCGATTTTG AGCCGTTATA AAGAATCTTG TAGCACCATT ACCCGTGAAT ATAACAATCG TCGACATAAA GATTTACCGC TTAAATCACT TGCCCTTTCA GACAACGAAG TTTCTGCACG TTACGAATTA CGTGACATGT TAAAAGGCGA ATTAGAAGTC GATACCGGCA TTAAATATGG TGACCGTTTA AACAACTTAT TAGACAACAT TGGCGTCGAT TTACTTGATG TTCTTTGTTG CGGTGAAGTA GAACGCTTTG TTTGTCGCTT GAATAATGTG TTCACTCAGG AAACTTTTAT TTGGACGGTT AAGAATAATC CGACAGGACG TTTTAATTAT TCTTACTCAG CCACTCTGTA CGCTGATGGT GAGCAAGCTG GTGTTATTTG TTGGGGTGGT AAAAACCTTG GTTGTTACGT GTCGTTCATG GGAACGGGTT GTAACGCTTT GGATATGAAA CGCCTCTATG AAGAAATCAA AAATATTCCA GCGCTTAAAA TTACCCGTAT TGATTTAGCG CATGACGATT ACGCAGGGAA GCACTCTATT AAGCGAGCAT TGAGTAAAGC CAAGAAAGGC CTGTTTAACT CTGGCGGCCG CCCTGCTTGT TATATGTATG TTGAATCTGG GCATTTAACA GAAAAAATGC TGAAAGAGAA CTTTAAAGAC TTAAAAGAAA TCAGTAACGA GTCCACTAAA TCAACGGCTA AGAAAACCTT TGGCTTTATT CCAAGCAAGG GAAAAACGCT TTATATCGGT TCTCGTGAAT CTGGCAAGCT GTTACGCATA TATGAAAAAG GTAAACAGCT AGGTGATATG AAATCTAAGT GGGTACGTTG GGAAGTTGAA TTGCATTCAA GCCAACGCGT TATACCACTT GATGCCATGG TAAAGCCGAG TGAATACCTT GCAGCCACTT ACCCAGCACT CAATTTTTTA AGTGTTGAGC AATGCAAAAT TAAAACCCTG GTTAAACAAG CCACCATGAC CATCGAGAAA ATTGTTGAAA ACCAAGTTAT CAGTACACGT AAAGCCATCA ACATGATGCG CGTAATTTGT GGTTTATCTG ATAGCGAAAT CGTAGAGAAA TTTGTAAAAG ACATTGAAGA GCCCGACTGT CGTTCGTCAA TGCCTAAACG GTTGAAAGCC TCTGTTATTG AAGAGTGGGT TTTACAACAA CAAGCACAAA CGGCAGCAGC TTAA
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Protein sequence | MKTKPTTIPC LVDALSLTWS PKELLNIKQM AKIGACIKSE LIVKAKDAAL NRELAKLENT KNKELLGTNA FNAHEYEAIL SRYKESCSTI TREYNNRRHK DLPLKSLALS DNEVSARYEL RDMLKGELEV DTGIKYGDRL NNLLDNIGVD LLDVLCCGEV ERFVCRLNNV FTQETFIWTV KNNPTGRFNY SYSATLYADG EQAGVICWGG KNLGCYVSFM GTGCNALDMK RLYEEIKNIP ALKITRIDLA HDDYAGKHSI KRALSKAKKG LFNSGGRPAC YMYVESGHLT EKMLKENFKD LKEISNESTK STAKKTFGFI PSKGKTLYIG SRESGKLLRI YEKGKQLGDM KSKWVRWEVE LHSSQRVIPL DAMVKPSEYL AATYPALNFL SVEQCKIKTL VKQATMTIEK IVENQVISTR KAINMMRVIC GLSDSEIVEK FVKDIEEPDC RSSMPKRLKA SVIEEWVLQQ QAQTAAA
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