| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0861 |
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| Symbol | pqqB |
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| ID | 3519222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 876088 |
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| End bp | 877005 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283326 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
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| Protein accession | YP_267610 |
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| Protein GI | 71279293 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATTT TAATTCTTGG TTCGGCTGCT GGTGGTGGTT TTCCACAGTG GAACTGTCAT
TGTGCTAATT GTAAAGGATT ACGAGCCGGA ACCATAAAAG CTACACCGCG TACACAGTCT
TCTATCGCTG TCAGTCCTGA CGGTAAAAAT TGGGCACTCA TTAATGCTTC ACCCGATATT
CGTCAGCAAA TAAATCAATC CCCACAATTA TGGCCTGAGC AAGGTGCACG GGGTACTAAT
ATTCGTGGCG CCATTCTAAC CGATAGCCAA ATTGATCACA CCACAGGCTT AATTACCTTA
CGTGAAGGCT TACCCCTTGA TGTTTATTGT TCTCATGTTG TTTATGAAGA TTTAACTTCT
GCATATCCGT TATTTAACAT GCTTGAACAC TGGCACGGCG GTCTATCATT TAAACCTATT
GGTTATCAGC AGAGTGATGC TTTTAGTGTT GAAGGTGTTG CAGATATCGA GTTCGTTCCC
GTGACTATAG AGTCGAATGC TCCTCCTTAT TCTAAATACC GTGACAAAGT CGTTGCTGGT
AACAATATCG GCCTCAAAAT TGTTGATAAA ACGAGTGGGA AATACCTTTT TTATTTACCG
GGCATCGTAG AAAGCACACC TGAAGTTGAA GAGATATTGG CAGATGCTAG CTGCGTATTA
ATCGATGGCA CACTCTGGCT TGACGATGAA ATGATCGCAC AAGGCGTTGG TACTAAACTT
GGATCCCAAA TGGGCCATAT GCCAGTAAAT GGTGATTTTG GCACTGTCGC ATTACTCAAT
AAATTTGATA TCGATCGAAA GATTTTAATC CATATTAATA ACACCAACCC TATTCTCAAT
GAAGAATCAG CACAACATCA ATTTGTGTTG GACAATGGTG TTGAAATAGC CGTAGATGGC
ATGGAAATAA CAATATAA
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| Protein sequence | MQILILGSAA GGGFPQWNCH CANCKGLRAG TIKATPRTQS SIAVSPDGKN WALINASPDI
RQQINQSPQL WPEQGARGTN IRGAILTDSQ IDHTTGLITL REGLPLDVYC SHVVYEDLTS
AYPLFNMLEH WHGGLSFKPI GYQQSDAFSV EGVADIEFVP VTIESNAPPY SKYRDKVVAG
NNIGLKIVDK TSGKYLFYLP GIVESTPEVE EILADASCVL IDGTLWLDDE MIAQGVGTKL
GSQMGHMPVN GDFGTVALLN KFDIDRKILI HINNTNPILN EESAQHQFVL DNGVEIAVDG
MEITI
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