| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0820 |
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| Symbol | |
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| ID | 3521833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 835988 |
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| End bp | 836989 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637283285 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_267569 |
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| Protein GI | 71281361 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTTG AAGATGAGTA TCAAGTAACG TCTGAATTCA GCGATCGTAC CAATGACTTC
CTCTCTAGCC ATTTAATTTC CCCAACACCA GTAAATTATT CAGTCATTTA TCTCCATATC
AGTAATGAAA ACGAAATGTT ATCTGCTGCT ATCAATAAAA AACTGAAACA GGGAGTATTA
ATCACCGCAG ATTTCATGGC TGATTTATTT GAACGTTATG TATCTCTTAC AGAGCAAATT
GAAAATACGG TATTAGCCCC TTTTGAAAAA ACCTTAAGTA AAACACTAGA ACAAATTACT
AAACAGGTAA GTAATGAAGA TAAAGCGGCA ATTAATTTAG AGAAGTTAGA TAAAATTTTA
GCTAAGACTA AAACTACTAC CTCAATGGAC AATATTGTTA GTTATCTTTT TAATACGATA
AATAGCACTA AAGCTCAACA TGAAGAGCTG TCTCAAAAGT TGACCACGAC TCAACAAGAA
ATTAATCAAT TAAAAGACAA ACTAGCTTCA TCAAGACAAG AAGCTTTAGT TGACTCTTTA
ACCGGTTTAT TGAATCGTCG TGGCTGTGAT GAGAAATTAC AAAACTTATC TCACGCCGAT
ACTCATTCCT CTTTAGCCAT TGATATTGAT CATTTTAAAA AGGTTAATGA CACCTTTGGC
CACTTTATTG GGGACAAAGT TATTCAGCGT ATAGCAAAAA CCATTCAAAG CCATATTGGT
GAGCAAGATC TCGCGGTACG TTTTGGTGGT GAAGAGTTTG TGGTGGTAAT GACTAACACT
CCCCTTGCAG AGGCAAAAAA CATTGCTGAG AAAATACGTA TTGGTATCTC TAAAATGCGA
TTAAAGCAAA GAGATACCAA TACCTTTTTA CCCCCAATTT CAGTGTCTAT TGGTATTGCT
CAAAATGATA ACATTTCAGA GTGGACCACT CTGTTTGAAC AAGCAGATAC TGCGCTTTAT
CAAGCTAAAA ACTCCGGACG CAACTGCTGT ATTTGTGCGT AG
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| Protein sequence | MSFEDEYQVT SEFSDRTNDF LSSHLISPTP VNYSVIYLHI SNENEMLSAA INKKLKQGVL
ITADFMADLF ERYVSLTEQI ENTVLAPFEK TLSKTLEQIT KQVSNEDKAA INLEKLDKIL
AKTKTTTSMD NIVSYLFNTI NSTKAQHEEL SQKLTTTQQE INQLKDKLAS SRQEALVDSL
TGLLNRRGCD EKLQNLSHAD THSSLAIDID HFKKVNDTFG HFIGDKVIQR IAKTIQSHIG
EQDLAVRFGG EEFVVVMTNT PLAEAKNIAE KIRIGISKMR LKQRDTNTFL PPISVSIGIA
QNDNISEWTT LFEQADTALY QAKNSGRNCC ICA
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