| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0808 |
|---|
| Symbol | |
|---|
| ID | 3520140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 826795 |
|---|
| End bp | 827652 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637283273 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_267557 |
|---|
| Protein GI | 71279680 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4757] Predicted alpha/beta hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00976323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATA TAAAAGATGT AGAATTAACA GCCGATAATG GCAAACCTGT TTATGCTACC
TTTTTTTGCC CAAAAGAAGA GATAAAAGCG GCGGTAGTGA TCGCTCCGGC TTTAGGGGTA
GATAAAATTT TCTACCAAGA TTTCGCTTTA TGGTTAGCGA GTTATGGCTA CCTAGTTACT
ACCTTTGATT ATTCTTCTAT GGGGTCTGCT GATAAAGTGC ATTATAAAGA ATCAGATACA
ACCATCACTG ATTGGGCGGT TTTTGATTGT AAAAAAATAT TAGAGCAAGT ATCAATTGAG
ATTAAAGATA AAGATATTTA TTGGATTGGC CACAGTTTAG GCGGTCAAAT TACCGCAATG
ATCCCTAATA TTGGCTTGGT TTCAAAAGTG ATCACTGTTG CTAGTGGTAG TGGTTATTGG
CGTAAAAATG CTGCGGCATT AAAATACAAA GTATGGTTTC TCTGGTACTT TGTTGCGCCA
GTGTCACTAA AAGTATTAGG TTACTTTCCT GGTAAACGTT TAGGTATGGT AGGTAATTTA
CCCTTTGGTG TAATGAAGCA ATGGCGAGCA TGGTGTTTAC ACCCTCACTA TTTATTAGGG
ATAGAAAACC AAGCAGTACA AATGGCTTAC CAGTTATTTA ATAAACCTAT GACCTCAATT
TCCTTTACTG ACGATCAACT TATGTCTGCT GAAAACATTA ATTCTTTACA TGGATTTTTT
AGTGATATTT CACCTAAAAT GATCAGGATT TCTGCTGAAC AATTAAATAT TGAGAATATT
GGCCATTTTG GTTTTTTTAA GAAAAAATTT AAAAGCGCCT TATGGGAATC ACAATTACTT
CCAGAATTAA CAACTTAA
|
|---|
| Protein sequence | MIDIKDVELT ADNGKPVYAT FFCPKEEIKA AVVIAPALGV DKIFYQDFAL WLASYGYLVT
TFDYSSMGSA DKVHYKESDT TITDWAVFDC KKILEQVSIE IKDKDIYWIG HSLGGQITAM
IPNIGLVSKV ITVASGSGYW RKNAAALKYK VWFLWYFVAP VSLKVLGYFP GKRLGMVGNL
PFGVMKQWRA WCLHPHYLLG IENQAVQMAY QLFNKPMTSI SFTDDQLMSA ENINSLHGFF
SDISPKMIRI SAEQLNIENI GHFGFFKKKF KSALWESQLL PELTT
|
|---|
| |