| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0798 |
|---|
| Symbol | |
|---|
| ID | 3522555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 816096 |
|---|
| End bp | 816995 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637283263 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_267547 |
|---|
| Protein GI | 71282083 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.748427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTGGA AATCGGTAAA TTTCGATTGG AATCATATTC GTGCCTTTTT AGTGACAGCT
GAAGAAGGCA CCCTCTCTGC TGCAGCGAAA GCGCTAGGTT TAACACAGCC AACGTTAAGC
CGGCAAGTTA GTGCACTTGA GACTGAGCTA TGTATTACGT TATTTGAACG AGTGGGACAA
CGTCTCGTGT TAACCAGCAG TGGCTTGAAG TTATTAGAAC ATGCTCGTGG CATGGGGGAT
GCGGCGTTAG AGTTTTCATT AGCAGTCACT GGCCAGTCTC AAAAAATAGA AGGCTCTGTT
ATTGTCTCTG CGGGTGAATT AACCGCGGCT TATATGTTAC CTAAAATAAT TTCCAAATTA
CGACGAGAAG AACCCGGCAT TGATATTGAA GTGGTAGTGA CGAATGAAGC TAGCGATCTC
AAGCGGCGCG AAGCTGATAT TGCTATTCGA AGTTTTCACC CTACGCAAAA TGATTTGATC
GCTAAAAAAA TAGGTGAAGA AGTTATTTGG CTTTACGGTA CGCCAGAATA TTTAGATCAG
CTTCCCACAA TACCAAGCTT TTCTGAACTA AAAGACATAC AAATCATTGG TTTTGACCGT
AGTAATTCGC TAACCGATGT ACTCAATAAA CAAGGTTGGC AGTTATCAAA AAAAAATTTT
TCACTGATTA CATCATTCCA GTTATTACAG CTCGCACTAT GTAAAGAAGG GCAAGGTGTA
ATTTTCTATC CGGAACAAAT GGGCGACCAA GAGCCTAATT TAGTTCGTGC GTACGAACAT
TTAGGCCCAG TAATGAAGCT CCCTGTTTGG TTGGTGTGCC ATCAAGAGCT GCGAACCAGC
CTTAGAGTTC GTAGAGTTTT TGATTTTATT GCCACTGAAC TAAGTGATAA TTTTTATTAA
|
|---|
| Protein sequence | MTWKSVNFDW NHIRAFLVTA EEGTLSAAAK ALGLTQPTLS RQVSALETEL CITLFERVGQ
RLVLTSSGLK LLEHARGMGD AALEFSLAVT GQSQKIEGSV IVSAGELTAA YMLPKIISKL
RREEPGIDIE VVVTNEASDL KRREADIAIR SFHPTQNDLI AKKIGEEVIW LYGTPEYLDQ
LPTIPSFSEL KDIQIIGFDR SNSLTDVLNK QGWQLSKKNF SLITSFQLLQ LALCKEGQGV
IFYPEQMGDQ EPNLVRAYEH LGPVMKLPVW LVCHQELRTS LRVRRVFDFI ATELSDNFY
|
|---|
| |