| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0786 |
|---|
| Symbol | |
|---|
| ID | 3518438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 805110 |
|---|
| End bp | 806144 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637283251 |
|---|
| Product | M50 family peptidase |
|---|
| Protein accession | YP_267535 |
|---|
| Protein GI | 71278980 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0883958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAT GGCAGCAACT ATTTTGGGGT GATAAATGTG TCTCTCAGAT TAATGCTAAT
GCCAATAGTG AGACATTTTC ACATCAATTT TCTTTGCAAA GAGAGGGAAG TGAACAGAGA
GAACTACAAG TTGAACTCAA AGGATCATTA CAGTGGCAGC CCTTTGACCT GCAGTTTCAG
CTTTTAGTCA ATGAGGAGCT GTTACATGAA AATACCCTCA ATGAAAAAGA CATAGAACAA
CGTCAAGTCA CGCAAGGTGA AAAGCAACCA ATTAAATTTA GCTTTGTTGG TATGGCTGGT
CTTGGTTTAA AACTATTGAA AAGTGCCAAG GTCATCAAAG TGTTGTTCGC TGCTGGTAGT
TTGGCTGCTT ATAGCTGGTT GTTTTCTATT GAGTTTGCTA TCGCACTAAT CCTCTGTTTA
GTCTTTCATG AGTATGGCCA TATTAAAGCG ATGAAATATT TTGGTTTGAA AACCAAAGGT
ATTTATCTCA TTCCCTTTGT TGGTGGCTTA GCACTTAGCG ATGACAAAAT TAATACTCGC
TGGCAAGATA TTGTCATTTC CATTATGGGG CCTTTCTTCG GCTTGATACT GTCTATCGCC
TGTTTAGTTG GCTATTGGCT TACCGATATA GAAATACTCG CTGGTTTAGC GGTATTTAAT
GCGCTACTTA ATTTATTTAA TATGTTGCCG GTATTGCCGT TAGATGGTGG ACACGTGCTT
AAAAGTATTG CGTTTTCAAT CAACTCTAAA GTGGGTTTAG TCGCATGTGT ATTAGGTGCA
GCATTGGGGG TATATATCAG TTACCACTTC GGTTTAGCCT TGCTAGGTTT TTTACTGGCT
ATTGGTAGCA TTGAAATATT CTTTGAATAC AAGCGTCGAC ATTTAAGTGA TCTATTACCC
TTAAATCGCT ATGCGCAAAT CGTATCAGCT CTGTGGTATG TCATTACTGT CGGTGGTTTA
AGTGCCATTA TTTGGTTTGT TGGTCAAACA GCTAATGACG CCTTGTCATT ACCGCTTAAA
ATACTCGGTA GTTAG
|
|---|
| Protein sequence | MAGWQQLFWG DKCVSQINAN ANSETFSHQF SLQREGSEQR ELQVELKGSL QWQPFDLQFQ
LLVNEELLHE NTLNEKDIEQ RQVTQGEKQP IKFSFVGMAG LGLKLLKSAK VIKVLFAAGS
LAAYSWLFSI EFAIALILCL VFHEYGHIKA MKYFGLKTKG IYLIPFVGGL ALSDDKINTR
WQDIVISIMG PFFGLILSIA CLVGYWLTDI EILAGLAVFN ALLNLFNMLP VLPLDGGHVL
KSIAFSINSK VGLVACVLGA ALGVYISYHF GLALLGFLLA IGSIEIFFEY KRRHLSDLLP
LNRYAQIVSA LWYVITVGGL SAIIWFVGQT ANDALSLPLK ILGS
|
|---|
| |