| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0784 |
|---|
| Symbol | |
|---|
| ID | 3520896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 804081 |
|---|
| End bp | 804623 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637283249 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_267533 |
|---|
| Protein GI | 71280430 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.632748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAA AAATACAACT TACCAAAGAA GATCTTAGAA AGAATAAGCC AACACGAGAT
GAATATTTAA CTAAGCCAAA AATCCCCTTG ATAGTGGTAT TAGATAATGT CACTAACAGC
TACAACATTG GTGCCTTTAT TCGTTTGGCT GATGCTTTTG CTATCGAAAA AGTCATAGTT
TGTGGCGCGC TAACAATTTC AGATAAGAAA ATGAAAAAAG CCTCGAGAAA TGAAGCGAAA
TGGGTTTGCG TTGAATATAG CGATAGTACT ACAGCAAGCT TACAAACATT ATTAGATGAA
GGACATGCCA TTTACAGTGT TGAGCTATGT CATGAGTCGG TTGATTACAC TAAGGTAACT
TATCCTGCTA AATGCGTATT AGTATTAGGC AATGAACGCA AAGGCGTGAG TGAAGCAGCA
TTGAAATTAA GCCTTCAACA AATACATATT CCCATGTTTG GCATGGGTAA CTCACTCAAT
GTGTCTACCG CTGGTGCTAT TGTCTTAGCC GAATGTGCTA ATCAAATTAG AAAACTGCCA
TAA
|
|---|
| Protein sequence | MDSKIQLTKE DLRKNKPTRD EYLTKPKIPL IVVLDNVTNS YNIGAFIRLA DAFAIEKVIV
CGALTISDKK MKKASRNEAK WVCVEYSDST TASLQTLLDE GHAIYSVELC HESVDYTKVT
YPAKCVLVLG NERKGVSEAA LKLSLQQIHI PMFGMGNSLN VSTAGAIVLA ECANQIRKLP
|
|---|
| |