| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0778 |
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| Symbol | |
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| ID | 3520721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 796448 |
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| End bp | 797833 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283243 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | YP_267527 |
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| Protein GI | 71280257 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAA AAATACTGAT CGCAGATGAT GATATTAATA TCATTGCCAG TTTAAAATTT
GTTTTAGCTG ATGAAGGCTT TGATATTGTG GCGGTCACAA CGCCACAAGC GGCTTTAGAG
AATTTAAAAA TTCAGAGTGT TGATTTAATT CTGCTTGATA TGAACTTTCA GCAAGACACA
ACCTCTGGTG CTGAAGGTGT TCAATTAGTG GAAGCAATCA CCGAACTTGA ACTTAATGTT
CCTATTATCG TGATGACTGG CTGGGCGACT ATTGATATTG CTGTTGAAGC CATGCAAGCT
GGCGCAAAAG ACTTCATCCA GAAACCGTGG AAAAATGAAC GTATGCTCAG CGCAATTGAC
AATCAATTAG CGTTAGCAAA ATCAGATAAA AAAGCCCAAC GACTGAGTCA GCAAAATCAG
CTACTTACCT CACAAGCCCA CCCTGGTAGT CGTGCAGGCA TCATTGCACA GTCTCAACCG
ATGCAAGAAC TATTGTCGAC CCTTGATGAC TTAGCTAAAA GCGATATGAG CATTTTATTA
ACTGGTGATA ATGGCACCGG TAAAAGCATG CTTGCAGCTT ACGTACATAG TGTTTCTAGT
CGAGAAAAAC ACTCTTTTGT GCCGGTTAAT ATGGGCGCAA TACCTGAATC ACTTTTTGAA
AGTGAAATGT TTGGCCATGT AAAAGGAGCG TTTACTGACG CCAAAGAAAA TCGAATTGGC
CGCTTTGAAA TGGCGGAGCA AGGTACTTTA TTTTTAGATG AACTTGCCAA TATTCCTTTT
GCACAACAAG CTAAACTGTT GCATGTGCTC GAAGCACAAC AATTTGAGGC GGTTGGCAGT
AGTAAATCAT TACATGCCGA CGTACGTATA ATATCGGCCA CTAACAGTGA CTTATTGGCT
GATATTAAAA ACAATACCTT TAGACAAGAT CTGTATTACC GATTAAATAC TATTGAGTTG
AGAGTGCCAT CGTTAAGCGA ACGCGCGGAA GACATCCCAG CGCTCGCGGC CCACTTTCTA
GAGTCTTTCA GCGCTAAATA CCATCGAGCG TGTCCTAAAC TGACTGACCA AGCTATTAAT
GCGATGCAAC AATATGACTG GCCGGGTAAT ATTCGTGAAC TTAGTCATAT GATGGAACGG
GTGCTGTTTA CCTGTAAAAA AGACAGTATT GAGACCGCAG AGCTGATGTT AACAGGCGCT
AATAATGCTG AAAATGGTGC CGTTGAATCT TTAGATGATC CCACGTTAAG CCTTGATGAA
ATTGAAAGAA AAACGTTAAT TAAGCGCCTG AAGTTTCACC GTGGAAATGC CACTGAAACA
GCGAAGTCTT TAGGGTTAAG CAGAAGCGGT TATTATCGAC GTTTGAGTAA GTATGAACTG
GATTAA
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| Protein sequence | MNKKILIADD DINIIASLKF VLADEGFDIV AVTTPQAALE NLKIQSVDLI LLDMNFQQDT
TSGAEGVQLV EAITELELNV PIIVMTGWAT IDIAVEAMQA GAKDFIQKPW KNERMLSAID
NQLALAKSDK KAQRLSQQNQ LLTSQAHPGS RAGIIAQSQP MQELLSTLDD LAKSDMSILL
TGDNGTGKSM LAAYVHSVSS REKHSFVPVN MGAIPESLFE SEMFGHVKGA FTDAKENRIG
RFEMAEQGTL FLDELANIPF AQQAKLLHVL EAQQFEAVGS SKSLHADVRI ISATNSDLLA
DIKNNTFRQD LYYRLNTIEL RVPSLSERAE DIPALAAHFL ESFSAKYHRA CPKLTDQAIN
AMQQYDWPGN IRELSHMMER VLFTCKKDSI ETAELMLTGA NNAENGAVES LDDPTLSLDE
IERKTLIKRL KFHRGNATET AKSLGLSRSG YYRRLSKYEL D
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