| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0776 |
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| Symbol | |
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| ID | 3520986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 793627 |
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| End bp | 796050 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283241 |
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| Product | putative permease |
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| Protein accession | YP_267525 |
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| Protein GI | 71280520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGT TAATAGATAT TAAATACGCT TTTCGCTTGT TATTTAAAGC GCCTAAATTT
ACTGCGATGA CCTTGGGGGT ATTAATCGGT GGATTATCGA TTAGTTTATT CACCTTCTCA
TTTTTATATA CCATGGTTTA CAAACCTCTA CCAATACCTG AGGCTGAAAC GGCAAAAGCG
ATTACTGTTG AATTTGACGG TAACTACAAC TTAATCACGG GTTATGAATA TAACAATGTT
AAAGAGAGTG TAACCAGTTT TGCCGAGTTT GGTGTTTATG ATAATCGTAA TATTCGTTTG
TCTGTTGAAC AATCAGGTAA AGATATTTCA GGAAGCTATG TCCAAAATGG TTTTTTTGAG
TTCAGTCGTA CTGAACCTAT TTTAGGTCGA ACGATACAAA CCCAAGATAA CAAAATAGGT
GCATCGCCAG TCGCATTAAT TAGCTATGAA ATTTGGCAGT CTGAACTTAA TGGCGATGAA
GGTGTTTTGT CAAAAAGCCT GATGCTAAAT GGGGTGATTA CTGATGTTAT TGGGGTTATG
CCAAAAGGAT ATCTATTTCC TAATACTTCA CAAATTTGGT TGCCACTGTC TGACAGCGTT
TTTAATGCTA CCGCAGAGCA AAGTGAAAAC TATTTTGCCT ATGGCCGAGT TAACGCTGGT
ACCACTATTG AACAAGCTGA ATTGGAGTTG GGGCAAGCCA TTAACCAAGT TTATCAACAG
AATGTAGCAT TATATAACAT GCCTGAGTTT GAAAAAGGCG CGAAGCTGAT GTCATTCCAA
GCGGCGCAAA CCAACGGTCA AGGCAGTATT GTTTTTGTCT TTTTAAACGC CATTTCATGG
TTGATTTTAT TACTTGCTTG TATCAACGTC GGCAATTTAT TACTCGCTCG TACCATTGAA
CGTCAAAAAG AAACCGCTAT TCGCGCTGCT TTGGGGGCAA CTAGCTCTCG CTTAGTTAGC
CAGTTAATGT GGGAAGGCGT TATCATTTCA ACGGTTGGTG GCATTTTGTC ATTACTATTG
GTTGGGGCTG CTTTAGATTA TACCGAAATT GCTTTTCACT CGTGGATTCC AGGTGGAGGT
TCCTTTTGGT GGCATTGGAG TATGGATCTA CAAACGTTGT TAATGGGCAT TGCATTTACC
GTGGTTACTA TTTTACTGTC AGCTTTTTTA CCGGCATGGC GCTCTGCAAA TCAAGACATT
AATACCACAT TAAGAGATGG AACCCGTGGT GCTCAAAGTA AAAAAGCAGG CAGGATTTCT
CGGATATTAG TCACTAGCCA AGTCTTTTTG GTCGCCACTT TAATGTTAAT TGGCTCTGTT
TCTGCCTACA TATCACATAA ATTGATTAAC CTTGAAATGG GCGATGATTA TAGCTATGTG
ATGTCAGCAA GAATGTCGAT ACCTGAAAAT AAATACCCAG AGCCTATGCA GCAATTAGCA
TTATTTCAAT CGTTAAAAGA AAACATTGAG CAACATCCTC AAGTGGTTGG TGTTGTTGCA
AACGATTGGC GACGTCAATC GACAGTGACT CTAGAAGGTA AGGATTATGC CTCTGAAGAG
AGCAAACCTA AAATTGATAC GATTACGGTT ATTGGTGATA CCAAAACAGT GGGTATTGAC
TTAGTCGCAG GGAGACAATT TACTCACCTT GATAAGTTGG GTCACCGTAA AACGGCTATG
ATTAGCCAAT CTATGGCTAA ACGTTATTGG CCGGGAGAGT CTGCTTTAGA AAAAAGTTTT
CAGGTGAAAA TAGATGATAA AAATGAAAAA GTTTTTATTG TTGGCGTTGT TACAGACCGT
CTTAATGCTT CTACTATGTT TGCTCGATTA GATAGTGCTG ATGAAGTTTA TGTATCAGGA
TTACAATTTA TCAATAGCTT CCAAATTGTT TATTATCGTA CTTTACCCAA TACGCAAAAC
GCGGAAGAAA TTTTCTATCA AGCCATGTTT GATACCGATC GCTCTATTGA GATGACATAT
TCGGTTCAAT TAGCGAGTAA GAACAGAAAC ATGATGCGAG ATTCAATGGG CTTAATGTCG
AATGTAACCT TTGGTACTGG CTTCTTTGCT TTATTATTGG CCATGGTGGG TATTTATGGC
TTAACGGCAA ATTCAGTGGC TCAGCGTACC CATGAAGTAG GTATTAGGCG TGCTGTTGGC
GCTAGTGATA AAAATATTAC ACAGATGTTT TTAAAGCAGG GGGCTCGTCA GTTAGTTATT
GGTTTAGGCT TGGCGGTGGT ACTGTTTGCT TTAATCTCTT TTGGTTTTCA TAAGTTTACT
GAAGAAATAT TCCCGGTATA CCTCTACTTT GGCATTGCTA TTACGGTAGT TTCGGTGCTT
TCAGTCATTG TTATGTTGGC AATTTTTGCA CCAACCAAAC GTGCCGTTAA AATGGAACCG
AGCATAGCGT TACGCTACGA ATAA
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| Protein sequence | MSMLIDIKYA FRLLFKAPKF TAMTLGVLIG GLSISLFTFS FLYTMVYKPL PIPEAETAKA
ITVEFDGNYN LITGYEYNNV KESVTSFAEF GVYDNRNIRL SVEQSGKDIS GSYVQNGFFE
FSRTEPILGR TIQTQDNKIG ASPVALISYE IWQSELNGDE GVLSKSLMLN GVITDVIGVM
PKGYLFPNTS QIWLPLSDSV FNATAEQSEN YFAYGRVNAG TTIEQAELEL GQAINQVYQQ
NVALYNMPEF EKGAKLMSFQ AAQTNGQGSI VFVFLNAISW LILLLACINV GNLLLARTIE
RQKETAIRAA LGATSSRLVS QLMWEGVIIS TVGGILSLLL VGAALDYTEI AFHSWIPGGG
SFWWHWSMDL QTLLMGIAFT VVTILLSAFL PAWRSANQDI NTTLRDGTRG AQSKKAGRIS
RILVTSQVFL VATLMLIGSV SAYISHKLIN LEMGDDYSYV MSARMSIPEN KYPEPMQQLA
LFQSLKENIE QHPQVVGVVA NDWRRQSTVT LEGKDYASEE SKPKIDTITV IGDTKTVGID
LVAGRQFTHL DKLGHRKTAM ISQSMAKRYW PGESALEKSF QVKIDDKNEK VFIVGVVTDR
LNASTMFARL DSADEVYVSG LQFINSFQIV YYRTLPNTQN AEEIFYQAMF DTDRSIEMTY
SVQLASKNRN MMRDSMGLMS NVTFGTGFFA LLLAMVGIYG LTANSVAQRT HEVGIRRAVG
ASDKNITQMF LKQGARQLVI GLGLAVVLFA LISFGFHKFT EEIFPVYLYF GIAITVVSVL
SVIVMLAIFA PTKRAVKMEP SIALRYE
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