Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0771 |
Symbol | |
ID | 3522468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 789454 |
End bp | 790404 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283236 |
Product | isochorismatase family protein |
Protein accession | YP_267520 |
Protein GI | 71281996 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAA CAACATTAAA CACTATTAGA AATTACGTTA TGCAAGCTAG CGCTCAGTGG ATCTCTGATT TTAATCAAGG GAATGTCCAA ACATGTATTA ACCGATATTT ACCCAGTGCA ACGATGCAAG TTCATCCCTT CGGAAAATTC ACTTCAATAG AGGCAATTGC TGATTTTTGG CTCGAGTTTG CCAAGAGTAA CCCAAGTGAC TTAGTTTATC GAAACATTGA GATCAAAGTA TTAAATGACC GACAAGCAGT ACTTTCAGCG AATTGGCGCA TGAATATTGC CAGTGGTTTT ATTAGTAAAG AGTTGTGGAC TCTGGCAGAA GACGGTCAGT GGTACCTTGA AGAAGACGAC TTTACTGTTT TAGCACAGCA TACAAAACCT GTTGACGATA AAAGAACGGC TTTAGTCTTG GTTGATCTAC AAAATGATTA TTTTAGTGGG GGTCGTTTTG AGCTTGATAA TACTGATTCT GCAGCCAAAC AAGCCAGTCA ATTATTAGCA CACTTTAGAC AAAAAGAACT GCCTGTTATT CATATGCAGC ATTTATTTGA AGAGACTAAT GCCGCCTTTT TCAGTGCAAA TACAGTAGGC GCTGAAATTG AATCAAGTGT TAAACCTACT GCAAATGAAC CTGTCATTAT AAAGCATCAA ATAGACAGTT TTATTGAGAC AACATTGGAA CAAACATTGG TTGAGTTAGG TATAGATAAC TTAGTCATAG TCGGTGCAAT GGCACAAGCG TGCGTGCAAA CACTTTGTCG AAGTGCGGTC AATAAAGGTT ATAAGTGCCA GGTCATCTCC GATGCGATTG CTGCACCTAA ATTAGAATAT CAGCAGCACA GCTTTACTGG AGGGCAATTG GTTGCAGCTA ACTTATTATC ATTGTCATTT GGTGGCGCTG ATATTACTGA TACAAAAGGA TGGTTACAAG AAAATAAGTA A
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Protein sequence | MNQTTLNTIR NYVMQASAQW ISDFNQGNVQ TCINRYLPSA TMQVHPFGKF TSIEAIADFW LEFAKSNPSD LVYRNIEIKV LNDRQAVLSA NWRMNIASGF ISKELWTLAE DGQWYLEEDD FTVLAQHTKP VDDKRTALVL VDLQNDYFSG GRFELDNTDS AAKQASQLLA HFRQKELPVI HMQHLFEETN AAFFSANTVG AEIESSVKPT ANEPVIIKHQ IDSFIETTLE QTLVELGIDN LVIVGAMAQA CVQTLCRSAV NKGYKCQVIS DAIAAPKLEY QQHSFTGGQL VAANLLSLSF GGADITDTKG WLQENK
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