| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0762 |
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| Symbol | gltD |
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| ID | 3520782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 775310 |
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| End bp | 776800 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637283227 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_267511 |
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| Protein GI | 71280317 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAATC CAACAGGATT TATCAACGTA GGTCGTGCCT TGCCAACTGA ACGCAAAGCA
GGTGAACGTT TATCTGATTG GCTTGAAGTC TATGAAGAAA TACCACTAAA AGCTGTAGAA
AAACAAGCTT CTCGCTGTAT GGACTGTGGC GTACCATTTT GTCAGTCGGC AAAATCAGAG
TTTGCGCCTG CCGTGGCGGG TTGTCCGGTT AACAATGTTA TTCCTGAATG GAATGACTTG
ATTTACCGAG GCCGTTGGAA AGATGCGATA GAGCTATTGC ATAAAACCAA TAACTTCCCT
GAGTTCACTG GGCGTGTGTG CCCAGCACCT TGTGAAGGCG CTTGTGTACT AGGTATCAAT
GCTGATCCTG TGGCTATTAA GTTACATGAA AAAGAAATTA TTGATCATGC CTTTAAGGAA
GGTTGGGTAG TCGCTCAACC ACCATCAGCA CGTACAGGTA AAAACGTTGC TGTCATAGGT
TCTGGACCTG CTGGTCTTGC TGCTGCAGCA CAGCTTAATA AAGCTGGCCA TATGGTTACT
GTCTATGAAC GTGCCGATCG TATCGGTGGT TTGTTAATGT ACGGTATTCC AAATATGAAG
CTGCAAAAGG AATTAGTACA ACGTCGCGTT GATATTTTAG CGGAAGAAGG CATTGTATTT
GTTACTAATA CCGAAGTAGG TAAAGACGTT AGTGTTGAGA AACTTGAAAG CGACTTTGAT
GCGATAGTGT TATGTATTGG CGCCACGGTG CCACGTGACT TACCTGTTGA AGGTCGAGAA
CTTAATGGTG TTCATTTTGC CATGGACTTC TTGAAAGCGA ATACTAAAAG TTTACTCGAT
AGCGAACATA AAGATGGCCA GTACATTAAT GCCCAAGGCA AAAATGTGGT CGTTATTGGT
GGTGGTGATA CTGGTACCGA TTGTATCGGC ACTTCATTAC GTCATCAGTG TACAAATGCT
TTACAACTCG AAATCATGCC GCGTCCACCA GAAAAACGTG AAGAGAATAA CAACCCTTGG
CCACAATGGC CAAAACGTTT GTTAGTTGAT TACGGTCAAA AGGAAGCTAT TGAGATTCAA
GGTCAAGATC CTCGTCAGTA TTTGGTGATG ACTAAGAAAA TTGAAAGTGA TGTGCAAGGT
AATGTTAAAG CGGTTCATAC GGTTGATATT ACTTGGGAAC GCAATGACAA AGGTCAAATG
TTCCCGCAGG AAGTTGCTGG CAGTGAAAAA GCTATTCCAG CCGATATCGT ACTCATCGCA
ATGGGCTTTA TGGGTCCTGA AGGTGGGTTA GTTGAGCAGT TTGGCCTTGA GCAAGATAAT
CGTTCTAACA TAGCTGCAGA ATACGATAAG TTTGCTACAA GCAAACAAGG CGTGTTCGCT
GCTGGTGATG GTCGCCGTGG TCAAAGCTTG ATTGTTTGGG CAATTGATGA AGGTCGTCGT
TGTGCGCGTG AAGTAGACAG TTACTTAATG GGTAAGAGCT ACTTACCTTA A
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| Protein sequence | MGNPTGFINV GRALPTERKA GERLSDWLEV YEEIPLKAVE KQASRCMDCG VPFCQSAKSE
FAPAVAGCPV NNVIPEWNDL IYRGRWKDAI ELLHKTNNFP EFTGRVCPAP CEGACVLGIN
ADPVAIKLHE KEIIDHAFKE GWVVAQPPSA RTGKNVAVIG SGPAGLAAAA QLNKAGHMVT
VYERADRIGG LLMYGIPNMK LQKELVQRRV DILAEEGIVF VTNTEVGKDV SVEKLESDFD
AIVLCIGATV PRDLPVEGRE LNGVHFAMDF LKANTKSLLD SEHKDGQYIN AQGKNVVVIG
GGDTGTDCIG TSLRHQCTNA LQLEIMPRPP EKREENNNPW PQWPKRLLVD YGQKEAIEIQ
GQDPRQYLVM TKKIESDVQG NVKAVHTVDI TWERNDKGQM FPQEVAGSEK AIPADIVLIA
MGFMGPEGGL VEQFGLEQDN RSNIAAEYDK FATSKQGVFA AGDGRRGQSL IVWAIDEGRR
CAREVDSYLM GKSYLP
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