Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0762 |
Symbol | gltD |
ID | 3520782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 775310 |
End bp | 776800 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637283227 |
Product | glutamate synthase subunit beta |
Protein accession | YP_267511 |
Protein GI | 71280317 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATC CAACAGGATT TATCAACGTA GGTCGTGCCT TGCCAACTGA ACGCAAAGCA GGTGAACGTT TATCTGATTG GCTTGAAGTC TATGAAGAAA TACCACTAAA AGCTGTAGAA AAACAAGCTT CTCGCTGTAT GGACTGTGGC GTACCATTTT GTCAGTCGGC AAAATCAGAG TTTGCGCCTG CCGTGGCGGG TTGTCCGGTT AACAATGTTA TTCCTGAATG GAATGACTTG ATTTACCGAG GCCGTTGGAA AGATGCGATA GAGCTATTGC ATAAAACCAA TAACTTCCCT GAGTTCACTG GGCGTGTGTG CCCAGCACCT TGTGAAGGCG CTTGTGTACT AGGTATCAAT GCTGATCCTG TGGCTATTAA GTTACATGAA AAAGAAATTA TTGATCATGC CTTTAAGGAA GGTTGGGTAG TCGCTCAACC ACCATCAGCA CGTACAGGTA AAAACGTTGC TGTCATAGGT TCTGGACCTG CTGGTCTTGC TGCTGCAGCA CAGCTTAATA AAGCTGGCCA TATGGTTACT GTCTATGAAC GTGCCGATCG TATCGGTGGT TTGTTAATGT ACGGTATTCC AAATATGAAG CTGCAAAAGG AATTAGTACA ACGTCGCGTT GATATTTTAG CGGAAGAAGG CATTGTATTT GTTACTAATA CCGAAGTAGG TAAAGACGTT AGTGTTGAGA AACTTGAAAG CGACTTTGAT GCGATAGTGT TATGTATTGG CGCCACGGTG CCACGTGACT TACCTGTTGA AGGTCGAGAA CTTAATGGTG TTCATTTTGC CATGGACTTC TTGAAAGCGA ATACTAAAAG TTTACTCGAT AGCGAACATA AAGATGGCCA GTACATTAAT GCCCAAGGCA AAAATGTGGT CGTTATTGGT GGTGGTGATA CTGGTACCGA TTGTATCGGC ACTTCATTAC GTCATCAGTG TACAAATGCT TTACAACTCG AAATCATGCC GCGTCCACCA GAAAAACGTG AAGAGAATAA CAACCCTTGG CCACAATGGC CAAAACGTTT GTTAGTTGAT TACGGTCAAA AGGAAGCTAT TGAGATTCAA GGTCAAGATC CTCGTCAGTA TTTGGTGATG ACTAAGAAAA TTGAAAGTGA TGTGCAAGGT AATGTTAAAG CGGTTCATAC GGTTGATATT ACTTGGGAAC GCAATGACAA AGGTCAAATG TTCCCGCAGG AAGTTGCTGG CAGTGAAAAA GCTATTCCAG CCGATATCGT ACTCATCGCA ATGGGCTTTA TGGGTCCTGA AGGTGGGTTA GTTGAGCAGT TTGGCCTTGA GCAAGATAAT CGTTCTAACA TAGCTGCAGA ATACGATAAG TTTGCTACAA GCAAACAAGG CGTGTTCGCT GCTGGTGATG GTCGCCGTGG TCAAAGCTTG ATTGTTTGGG CAATTGATGA AGGTCGTCGT TGTGCGCGTG AAGTAGACAG TTACTTAATG GGTAAGAGCT ACTTACCTTA A
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Protein sequence | MGNPTGFINV GRALPTERKA GERLSDWLEV YEEIPLKAVE KQASRCMDCG VPFCQSAKSE FAPAVAGCPV NNVIPEWNDL IYRGRWKDAI ELLHKTNNFP EFTGRVCPAP CEGACVLGIN ADPVAIKLHE KEIIDHAFKE GWVVAQPPSA RTGKNVAVIG SGPAGLAAAA QLNKAGHMVT VYERADRIGG LLMYGIPNMK LQKELVQRRV DILAEEGIVF VTNTEVGKDV SVEKLESDFD AIVLCIGATV PRDLPVEGRE LNGVHFAMDF LKANTKSLLD SEHKDGQYIN AQGKNVVVIG GGDTGTDCIG TSLRHQCTNA LQLEIMPRPP EKREENNNPW PQWPKRLLVD YGQKEAIEIQ GQDPRQYLVM TKKIESDVQG NVKAVHTVDI TWERNDKGQM FPQEVAGSEK AIPADIVLIA MGFMGPEGGL VEQFGLEQDN RSNIAAEYDK FATSKQGVFA AGDGRRGQSL IVWAIDEGRR CAREVDSYLM GKSYLP
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