| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0756 |
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| Symbol | |
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| ID | 3518896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 763721 |
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| End bp | 766702 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283221 |
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| Product | sensory box sensor histidine kinase/DNA-binding response regulator |
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| Protein accession | YP_267505 |
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| Protein GI | 71278484 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCCTTG TTACCTTTAT TCCTTACCCT TTTGTTGCCA ACTGGCTAAC AATGCATTTT
GAAAGCGCAT TAAATTTTGC TCTATTCACT TTACAAATTA TTAGCAGTAT ATTTTTATTT
TTTTGTTTTA AAAAAAACAC CTCACGCTCA TTCAAACTGT TTTGGCAATA TCTGCTTTTA
GCTGCACTCG CGATCGTCGC AAGTAAATTA TTAAATAGTA CACCTGCCAG TGTCAGCCAG
CAGTTGTATC AAGACTTTGC TTCGCTCTTT GTTTATTTCT TTATTTTATT GGCAATAGAA
ACCAACCCTC ACTTAAGTGA TGTCCCGCTT AATAAATATA TTGGAGGTAG AGTTCCGGCT
ATATTTTTCA CGCTGATTTG TTTTTGTTAT TTTATTTTAT TACCTGCCGA ATTTTCGGGA
AAGATATACC AAACAGCTAA ACCGTCCTTG TTATTTCACC TAGTAATAAA TAGCCTTATT
ATCGCCAGAT TAATACAGTG TTTAGTGAGT GTTAAAGACA ATTTCTGGCG TTATAGCTTT
GCACTACTTT CTGGGAGTGC TGTTTTTTTG CTGATAGGAA ATATCAGTGC CTTTATTGAT
AAGGATTCAG TCTTCATTAG CACCAACAGC TATTCTCTTC AGCTTATTGC TTTGCTGCCC
TATTTCTTAC TTATACTCGC CGCAAACATC ACCTTAAAAG TAAGTAAATT ACCTATCGCG
ATAGAAAAAG AACCTCATCC AGAACACTAT ATTTTACTGC TTATGCTTAT ACCAACCGCA
GCTCATTTAT ATGGCTATGA GCACAAGTTG TTTTATAGTG TTAATAGCAA TCTGCAATCT
ATTACCCTGC TTTTTTGGTT ATTTGTTGGC GCCACTTTAC TATCAGGTAT TGCAATCACT
CATCGCAGCC AAACTAAAAA GCTTAAGCAA AATTTACTTT CAGAAAAAAA CCAACACCAG
CAACTTAATA GTCTAAATAA TGACTTAACC GATTCGCTGA TTAACAGTGA AGATAAAGCG
ATAGTCAACG CTTCAAATAA TGCCATATTA ACAACTTCAA TTACTGGTGA AATATTATCG
GCTAACCCCG CAGCAGTACA AATGTTTCAA AGCCTAGAGC AAGAATTAAA AGGTATATCG
GTGAGTCGCT TATTTGCAGA AAAAGACGAA ATGCACTTCT TTTTTGACTT TCAAAGCAAT
GTCTATTCAT TGCAGCGTAA AGCTTTAGGC ATATCGGTGG AGTGTCTTTC GCTACGTTCA
GATGGTACAG AGTTTCCAGC ACAAGCAGAG TTACAGTGGG CTGATCGCGC TAAACAACCA
CTTATTGTCA TAACTTTCAT TAATTTATCC GCAAGAAAGC ATGCTGAAAG ACAAACTTTA
GAATTAAAAG ACAAATTCAT CGCTAACATT TCACATGAGT TTAGAACACC ACTCACCATT
ATTAATGGCA TTATCGATAG GTATATAACC AAAACAACCA ATGAATTAGA AAGTGAAGAA
TTAACCACTG CTAAGCGTAA TGGCCTTCGA TTAGTACGTA TGGTTGAGCA ACTGTTAGAG
CTTTCACGTT TAAGTGACAA TCCACAACTA TCGCTGAGTA CTTATCGATT ACAAACCCTA
ATGATGATGC CTGTTGATTC ATTTTCTCGT ATGGCATCAC AAAATAACTT AAGCTTTACG
AGCAATATTC CTGACGACTT GTGGTTAGAC TGTGATGGCC AAGCTTTTGA AAAAATCATC
TTTAACTTGC TTGCTAATGC GATAAAGTAC ACCCCTAACG GAGGCTCTGT ACAAGTAAAT
GCTTATGTCG AGCAAGACAC TATTATTTTA AACGTTATCG ACTCAGGTAT AGGTATCAAC
AAAGACTCTC TTGATAAAAT ATTTGGACGT TTTCAACGAG CTGACGATGT AAAGAACCAA
GCAACTTTTG GGGTAGGTAT AGGTTTGTCT TTAGTTAGTG AACTCGTAAA AGCCCACGGA
TGGCGTATCA GCTTAGTGAG CGAGCATGGC CACGGCAGTA AATTCAGCCT TTCAATACCG
TTAGCACCCG CAAATGAGGT AGAGGCAGAA ATATCGATGA GTATCTCAGA GAATGAGGTG
ACTTCATTAC TCACAGAACA GCGTTGTGTA GCGAATATTG AGAGCAATCA TTCACAGAAA
GTCGTTTTAG TGATAGAAGA TAATCTGGAT ATGCAAAGTC ATATAAAACA AGTCATTGAA
CAACAACATC ACTGCATTCT TGCCGGCAGT GGTGAGCTTG GCCTGCAATT AGCACAAGAA
TATATCCCTG ACCTCATTGT CTGCGATTTA ATGTTAACCG GTATTGATGG ATTTGAAGTG
TTAACACAGT TAAAGCAAGA TGAAATGACC GCGCATATTC CGGTAATATT ACTCACCGCA
AGATCTGATC TTGAAAGTAG GTTACAAGGC CTGAACCTAA ATGCTGATGA GTATTTAAGT
AAACCTTTCA ATCAACATGA ACTGTTAACG AGAATTCAAA ATTTAATTAC GAATAGGCAG
CAGCTACAAA AACGCTATTT ACAAAAATTT AATGAAGAGC GAAAAGCAGA GCGAAAAAGT
ACCAGCCAAC AAAATGTCGC AAACTTAACG CAAGAGACCG TTGAGCAAAT CAGTCTGGAA
GATAAGTTTT TACATAAACT TGAAGCGCTG ATCGCTAAAC ATTACACAGA GCCAGAGCTT
GATATCTCAT TACTTGCCAA AGAACTCGCC ATGAGTGAAA GACAATTACA GCGAAAAATT
AAAGTGATAC TAGGCACTAC GCCTAATAAC TTCATCAAAG AATTTCGTTT GAAAAAGGCA
CAAGCATTAC TAACCAGTGG TGCACAAATT GGGCGTATAG CTTTAGATGT AGGCTTCTCA
TCACAAACCT ATTTTGGCCG TTGTTTTAAA GAAAGTTATC ATTGCACGCC CAAACAATAC
CAACAAAAAA TGGCACAACA AAACTCAACT CCCGATTGTT AA
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| Protein sequence | MCLVTFIPYP FVANWLTMHF ESALNFALFT LQIISSIFLF FCFKKNTSRS FKLFWQYLLL
AALAIVASKL LNSTPASVSQ QLYQDFASLF VYFFILLAIE TNPHLSDVPL NKYIGGRVPA
IFFTLICFCY FILLPAEFSG KIYQTAKPSL LFHLVINSLI IARLIQCLVS VKDNFWRYSF
ALLSGSAVFL LIGNISAFID KDSVFISTNS YSLQLIALLP YFLLILAANI TLKVSKLPIA
IEKEPHPEHY ILLLMLIPTA AHLYGYEHKL FYSVNSNLQS ITLLFWLFVG ATLLSGIAIT
HRSQTKKLKQ NLLSEKNQHQ QLNSLNNDLT DSLINSEDKA IVNASNNAIL TTSITGEILS
ANPAAVQMFQ SLEQELKGIS VSRLFAEKDE MHFFFDFQSN VYSLQRKALG ISVECLSLRS
DGTEFPAQAE LQWADRAKQP LIVITFINLS ARKHAERQTL ELKDKFIANI SHEFRTPLTI
INGIIDRYIT KTTNELESEE LTTAKRNGLR LVRMVEQLLE LSRLSDNPQL SLSTYRLQTL
MMMPVDSFSR MASQNNLSFT SNIPDDLWLD CDGQAFEKII FNLLANAIKY TPNGGSVQVN
AYVEQDTIIL NVIDSGIGIN KDSLDKIFGR FQRADDVKNQ ATFGVGIGLS LVSELVKAHG
WRISLVSEHG HGSKFSLSIP LAPANEVEAE ISMSISENEV TSLLTEQRCV ANIESNHSQK
VVLVIEDNLD MQSHIKQVIE QQHHCILAGS GELGLQLAQE YIPDLIVCDL MLTGIDGFEV
LTQLKQDEMT AHIPVILLTA RSDLESRLQG LNLNADEYLS KPFNQHELLT RIQNLITNRQ
QLQKRYLQKF NEERKAERKS TSQQNVANLT QETVEQISLE DKFLHKLEAL IAKHYTEPEL
DISLLAKELA MSERQLQRKI KVILGTTPNN FIKEFRLKKA QALLTSGAQI GRIALDVGFS
SQTYFGRCFK ESYHCTPKQY QQKMAQQNST PDC
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