| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0755 |
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| Symbol | |
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| ID | 3519195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 760546 |
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| End bp | 763707 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637283220 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_267504 |
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| Protein GI | 71278198 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAATA TTCTTCTTTT GTTATTTCTT ATTAGTCTTC ATTTCAGTGT TTTTGCACAA
GAAGTCAAAT TGTTTAAAAA CTTTGGTATT GACAACCCAA TGTCCTATAA CTTTGTCAGA
ACAATTGTCC AAGATAAAGA TGGTTTTATG TGGTTTGGTT CATCTGAGGG GCTAGACCGA
TTTGATGGCC ACCAAACCCT AAGTTTTCAG CATGATAGCT CTCGGCCTAG TTCACTTAGC
TCTAATGTAA TCAGTCGTAT TCTTATTGAT AAACAACAAC GTATTTGGGT GGGAACTTTC
GGTGGGGGCT TGAATTTATA TAGAGAAACA ACTCAAGACT TTTTACATTT TACCACTAAA
ACAAAAAATG CAACGTTAAC TAATAATTCT GTGAATGCAC TATTTGAGGA TAGTGAAGGT
AAAATTTGGG TTGCTACCGA AAATGGCTTA AATATTCTCA GATCTCATGA CGAAAAGTGG
TCAACTCAGC AAATATTTCA AGAGCTAGGT AATCCTAATA GCCTTACGCA TAATGCTGTA
CTTTCAATTA TTGAGACCCG CAATCAAGAA ATTTGGGTTG GTACAAATGG CGGGGGTATT
TCGGTATTTG ATTTACAAGG ACATTTTATT AAATCCATAA AGTACGGTGA TCAAAATAGT
GCGACTTATG TAAACAAATT TGTCAGTAGT TTGCACTTAG ATATTAATGA AAATGTTTGG
ATCGGCACAG TTGATAGCGG TTTGCTGAAG TATACTCCTA GTACAGAGCA ATTTATTCAC
TTTCAACTTA ATGTTGATGA TCAGTCAACG ATTAGCAGTA ATGCAATAAG TAACATTTTT
CAGGATTCAG AACAAAACAT TTGGATTGCC ACAGATAATG GTTTATCTAT TTATAATTAC
AAAACCAATC ATTTCAGTCG ATATAATTAC TCTCCGAATA ATCCATACAG TATAAGTAAT
GATTTTGTTC TCACTTTTTT TGAAGATAAT CATAAGGTGA TGTGGATAGG TACTTTTTCT
GGAGTTAATC GTTGGGATCC TAACCTAGCG ACTTTTCGAC AATATAGTAC TCAAACGGAT
CCTGTTTTAA AAAATCACAA TATCACTAGT TTTGCTCAGT TCGATAAAGA AAATATATAT
TTTAGTACCT ATAGCGCTGG AATTTATCGG TTGTCGCAAT ATGATAATTC AATTTCAACT
GCCGACTTTA ACGCTTCGTT TTCAGAATAT AGAATTATGA CTATGTTTGC CGATGAAAAC
ACTTTATGGG TGGGGACGCG AGCTTCAGGA TTGTTTTCAA TAAATTTAAC AACGAAGAAA
GTTATTTCAT ATAGTCATGA TGCTGAAAAC AATAATTCTA TTTCGGCAAA TAGTATTACG
GATATTATTA AAGATAGGAA TGGCAACCTT TGGGTATCTA CTTTCCATCA AGGACTTAAT
TTATTAAATA AAGATGGTAC TTTTAAACGG TTTATAAAAA ACAAGTTAAA TAGAGAAAAA
GGGCCTGGCA GTAATCATGT TGTACAATTG TTAGAGGATG ACCAAGGCTT TATATGGTTG
GCTACTTTTG GTGGTGGGAT AAGTCGTTTT GACCCTATGA AGAGAACGTT TAAACACTTT
AGTCATGAGG AAAATAACCT TAATAGTATT TCTGATGATT TTTCATGGAT CATGCTGTTA
GACAATAATA AAAACCTTTG GTTTGGTACT CAATCTTCAG GCTTTAGCAT ATTAAGCCGT
GAAAATCGTC AGAATAACAA CTTTTCATTT ACTCACCTTG ATACTAAAGA CGGTATGAAA
AGTTTGACAG TATACGGCAT CACTCAAGAT GCTTATGATG ATATTTGGTT TAGCACCAAT
AAAGGTATAT CTCGTTATTC ATTGGGTGAT AAAAGCTTTA AGCATTTCAA CCTGACTCAT
GGCCTAGTTG ATCTCGAGTA CACTCACTCT GCTGTATTTC GCTCGATGGA TAACACATTA
TACTTTGGTG CAGGTAAAGG AATGAATAGT ATCAATCCTG AAAAAATAAA TACCAGTATT
TTTTCACCCG AAGTTCGATT AACAAGTATT TTAAAATTGA ATGAGCCGAT GCCCTTAGGA
AGCTCATTAT CAAAATTAAC CCAATTGGAA TTTGACTACA GTGAACAACT GATCTCATTC
GAATATGTCG GATTAAATTA CGCAGCTCCA GAGTCAACAC GTTATAAATA CCGCTTATTA
GGGTTTGACC AAGAATGGAT AGATGCCGGT AAGTCACGAC GAGCCACTTA TACCAATTTA
CCGGCAGGTA GCTACCAGCT ACAGGTGATT GCTGCTAATA ACGATAATAT GTGGAGTGAA
CCAGGATTAT CCCTTGATAT TGTAGTTAAA CCAGCCCCGT GGAATACTTG GTGGGCGTAT
GTGCTTTATG CCGCATTGAT TGCCTTATTA CTGTTAACTT ATTCGCGTTT TTTAAACCGA
AAGTTACTTA TTGAACAGCA ACAAAAAGCT AATTTAAAGC AGCAAGTAAG AGATAAAACA
CAAGAATTTC ATTTGAAGAA TGTTGAGCTT GAACAGGCAA ATAAACAGTT AGAGAATGCG
GCAACGGTAG ATAAAGTGAC AGGCGTTAAA AGCCGTCGTT ATTTAGATAT TTATATCGAA
CAAGCTAGCC AACTGATGTC TCAAATTCAT GAAAATATTC TGCCCGTACA GCGCAGCCTA
TTACCACGCT TATACCTTGT CATGATAAAA CTTGAGAATA TAGAGCAAGT AACTAATAGC
CAATTGGTTA ACCTTACTGA CCTACTACTA TATAGTCGAA ATAATGAAGA TTTGGTTATT
CGGTGGGCTG ATGACACCTT TGTTATTATC GGTTATGAAA AAGATGATAA CACCCGTGAG
TTGGTAACTC GCTTAACGGA TCGTTTTGCA CAAGTATTGG GCCATGGCAT TAAATCAAAT
GTGGCTTATT CTTTTTACCC GTTTAATTTT GAACAACCTA TGGCGCTATC ATGGGATCAA
GTGAGTGTTA TTGCTGAACA TGCCTTAAAG GTTGCTCGAG ATAATAACAT GAATTGGCTG
GGGCTTTATG CACCTAAGGT GCAGCCGTTT AACTATTTAG ATGTTATTCA GCAACAAGAT
GTTGGCGAAT TAAGTAAATT AGTCAAATTA AAGCAGGGTT AG
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| Protein sequence | MKNILLLLFL ISLHFSVFAQ EVKLFKNFGI DNPMSYNFVR TIVQDKDGFM WFGSSEGLDR
FDGHQTLSFQ HDSSRPSSLS SNVISRILID KQQRIWVGTF GGGLNLYRET TQDFLHFTTK
TKNATLTNNS VNALFEDSEG KIWVATENGL NILRSHDEKW STQQIFQELG NPNSLTHNAV
LSIIETRNQE IWVGTNGGGI SVFDLQGHFI KSIKYGDQNS ATYVNKFVSS LHLDINENVW
IGTVDSGLLK YTPSTEQFIH FQLNVDDQST ISSNAISNIF QDSEQNIWIA TDNGLSIYNY
KTNHFSRYNY SPNNPYSISN DFVLTFFEDN HKVMWIGTFS GVNRWDPNLA TFRQYSTQTD
PVLKNHNITS FAQFDKENIY FSTYSAGIYR LSQYDNSIST ADFNASFSEY RIMTMFADEN
TLWVGTRASG LFSINLTTKK VISYSHDAEN NNSISANSIT DIIKDRNGNL WVSTFHQGLN
LLNKDGTFKR FIKNKLNREK GPGSNHVVQL LEDDQGFIWL ATFGGGISRF DPMKRTFKHF
SHEENNLNSI SDDFSWIMLL DNNKNLWFGT QSSGFSILSR ENRQNNNFSF THLDTKDGMK
SLTVYGITQD AYDDIWFSTN KGISRYSLGD KSFKHFNLTH GLVDLEYTHS AVFRSMDNTL
YFGAGKGMNS INPEKINTSI FSPEVRLTSI LKLNEPMPLG SSLSKLTQLE FDYSEQLISF
EYVGLNYAAP ESTRYKYRLL GFDQEWIDAG KSRRATYTNL PAGSYQLQVI AANNDNMWSE
PGLSLDIVVK PAPWNTWWAY VLYAALIALL LLTYSRFLNR KLLIEQQQKA NLKQQVRDKT
QEFHLKNVEL EQANKQLENA ATVDKVTGVK SRRYLDIYIE QASQLMSQIH ENILPVQRSL
LPRLYLVMIK LENIEQVTNS QLVNLTDLLL YSRNNEDLVI RWADDTFVII GYEKDDNTRE
LVTRLTDRFA QVLGHGIKSN VAYSFYPFNF EQPMALSWDQ VSVIAEHALK VARDNNMNWL
GLYAPKVQPF NYLDVIQQQD VGELSKLVKL KQG
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