Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0751 |
Symbol | |
ID | 3518767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 753796 |
End bp | 756165 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637283216 |
Product | cold-active alkaline serine protease |
Protein accession | YP_267500 |
Protein GI | 71278628 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA ATAGAAAGCT CGTATTAAGT ACCATAGCCT TATCCGTTTT AGCCGTGACT AGTGCCGCGA GTAATGCAAC ACCTCAAGCG CAACTTAATA AAGCAGAAAA AATGACTACG GCGCAGTCTT CAACACTTAG TTTTGCGCAG TGGCGTGCTC AACAAAAACT TGAACGCACT GATTACACTG ACCGTTTAAT TATTACCTTT AAAGATAAGA AGCAAGGTAA GAGTGTTCCT CCTGGTCTAG CTAAAAAAAT CGGTTTAAAT TTAAAACACG TTAAAATATT AAAAAATAAT AGCCATGTAA TTGCTCTTGA TGAAATGCAT GCGGTAAAAG ATGTTGAGAA ATTCATTGAA AAACTACGCA AGCACCCTTC TGTTGTATCG ATAGAACCAG ATTATCAACG TTTTTTAATG GCGCAAAACC AACCTTGGGG AATATCAAAA ACCCAGTCTG ATCAATTAAC TGATAATGAC GCCGCTAACA TGACGGTATG TATTATCGAT TCAGGTTATC AACGTAACAA TCCAGATTTA AATGCAAACA ATGCTGCAGG TACCAATAAC TCGGGTACAG GTAACTGGTA TGAAAATGGT GGTTCTCACG GAACACACGT AGCAGGTACT ATTGCTGGGG TAAATAACAG CGAAGGTGTT GTTGGTATTT TGCCAAGCAC TAACGTTAAT CTACATATTG TAAAAGTATT TAACGAAGCA GGTTGGGGCT ACTCTGGCGA CTTATCTGAC GCAGTTGATA CTTGTGTAAA TAACGGCGCT AAAGTTATCA ATATGAGCTT GGGTGGTTCT GGTTCAAGTA ACACTGAAAA AAATGCCTTA CAAGCTGCTG CTGATACTGG TGTATTGCTT ATTGCTGCTT CAGGTAACGA TGGTAACGCT ACTCTGTCAT ATCCAGCTTC TTACGATGCA GTTATGGCTG TTGGCGCATT AGACAGCAAT AACCAACATG CTGAGTTCTC TCAATATACT AGCCAAGTTG AAGTATCTGC ACCTGGCGAA GCTATTTTAT CTACTGTGGC TGGTGATGGT CGTTTAGGTT TTATTACTGT CGGTTCAACA ACCTATGGTA ATGACAGTGT TGTTCCTCAA ACTCATTACA TTCAAAGTGC TGGTAACTTC GTTGTTAGCA ATGTTGATGG TGCTGCCAAT GGCGTATTAT CAAGCTGTAC TATTTCAGGT AGCAGCTACA GCTGTTCAAA CGTAAATGGC AATATTTGTT TAGCTGAGCG TAATGATAAC CAAAAAGGGA GTAATTACCC TGAGATCAAC CCAGCTAAAG CTTGTGCTGA TGCTGGCGCA TCTGCTGTTA TCGTTTATAG TGACAGTACT CGTCCTGGCT TACAAAATCC TTTCCTAGTT GATGCAAATA CTGACGTAAC TGTACCAACC GTTTCTGTTA GCCGTGCATT AGGTCAACAA CTGATGACCC AATTAGGGTC TAACGCTAGC TTAACCGTTA ATAGCTCACA AGATTATGCC TATTATAATG GTACTTCTAT GGCAACACCT CATGTCACAG GTGTTGCAGC ATTAGTATGG AGCAATAACC CAAACTGTAC TGCCGACGAT GTACGTAGTG CATTGAAAAA TACTGCGGTT GATTTAGATG CAGCAGGTCG TGATGACAAA ACAGGATTTG GCTTAGTACA AGCAAAAGCA GCGTCTGATG CTTTAGCAGC TAGTTGTGGC GGCGGTACAA CACCTCCACC ACCAACAGGT AATACGCTTA CTAATGGTGT AGCTAAAACC AACCTTGGCT CAAGCACAGA ACTTAGCTTT ACTATGGAAG TTCCTGCTGG TGCCACTGAG TTAAACTTTG CTATGGCTGG TGGTACTGGT GATGCAGATC TTTATGTTAA ATTTGGTTCA GCACCAACAA CTAGCAGCTA TGATTGTCGT CCATATAAAG GCGGTAACAC TGAAAGCTGT CCAATAGCGA GCGTTCAAGC AGGTACTTAC CACGTTAAAA TGATTGCTTA TTCAGCATTT ACGGGAGTTA GTTTAACAGG CAGTTTCACC GAACCTACCA CAGGTGGCGG CGCTACTGGC GGCAGTGCTT CAGTAACAGA TATTAGTGTT GCTCGACAAG CTTGGACATA CTACACCATT GACGTTCCTG CTGGCATGGC GACATTAGAT TTTGCTATGA GCGGTGGTAC AGGTGATGCG GATATGTATA TTAGACGTGG TTCTCAACCG ACCTCTTCAA CGTATGATTG TCGTCCATAC AAAAGTGGTA ACACTGAAGC TTGTGCATTT ACCAACCCAG CAGCTGATAC TTGGCATATA GGTGTTTACG GTTACTCTGC AGCAAGCGGT GTTAGCTTAG ACGTAACTTA TAACCCATAA
|
Protein sequence | MKNNRKLVLS TIALSVLAVT SAASNATPQA QLNKAEKMTT AQSSTLSFAQ WRAQQKLERT DYTDRLIITF KDKKQGKSVP PGLAKKIGLN LKHVKILKNN SHVIALDEMH AVKDVEKFIE KLRKHPSVVS IEPDYQRFLM AQNQPWGISK TQSDQLTDND AANMTVCIID SGYQRNNPDL NANNAAGTNN SGTGNWYENG GSHGTHVAGT IAGVNNSEGV VGILPSTNVN LHIVKVFNEA GWGYSGDLSD AVDTCVNNGA KVINMSLGGS GSSNTEKNAL QAAADTGVLL IAASGNDGNA TLSYPASYDA VMAVGALDSN NQHAEFSQYT SQVEVSAPGE AILSTVAGDG RLGFITVGST TYGNDSVVPQ THYIQSAGNF VVSNVDGAAN GVLSSCTISG SSYSCSNVNG NICLAERNDN QKGSNYPEIN PAKACADAGA SAVIVYSDST RPGLQNPFLV DANTDVTVPT VSVSRALGQQ LMTQLGSNAS LTVNSSQDYA YYNGTSMATP HVTGVAALVW SNNPNCTADD VRSALKNTAV DLDAAGRDDK TGFGLVQAKA ASDALAASCG GGTTPPPPTG NTLTNGVAKT NLGSSTELSF TMEVPAGATE LNFAMAGGTG DADLYVKFGS APTTSSYDCR PYKGGNTESC PIASVQAGTY HVKMIAYSAF TGVSLTGSFT EPTTGGGATG GSASVTDISV ARQAWTYYTI DVPAGMATLD FAMSGGTGDA DMYIRRGSQP TSSTYDCRPY KSGNTEACAF TNPAADTWHI GVYGYSAASG VSLDVTYNP
|
| |