| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0745 |
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| Symbol | |
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| ID | 3521881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 746998 |
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| End bp | 750081 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283210 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_267495 |
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| Protein GI | 71281409 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTA CCCAAGTAGC TTTTACCTAC CGAAAAAGCG TGTTTTTGAT TATTGCTGTG
TTACTGATTA ATGGCCTCTT TGCTTACTTC ACTTTGCCCG CGCAAGAAGA TCCAACGATT
ACCATTCGTG AAGCGATTGT TAGTACTTCT TTTCCTGGTA TGGCGCCCGA TAGAATTGAG
CAGTTAATCA CTAAAAAATT AGAAGAAGAA ATACGAAAAA TACCGCAAGT AAAAGAGATA
AAATCTAGCT CAGCCACTGG CATATCTATT ATTCACGTTA AAATTTACGA CCGCTATTTT
AATCTTGATG ATATTTGGCA GAACCTGCGC AATAAAGTGA CTGCAGCACA TAATAAAATG
CCCTCTGGCA CCCATACTCC TTTTGTTAAT GATGAGTTTG GTGATGTATC TGTTGTTACC
TTAGCACTAA CCGCTGATGG GTTTGATCTG GGTGAGATGT ATGATATTGC ACAACATATT
CGCGATACCT TATATGGCGT CGAGGGTACT AAAAAAATTG AAATATTAGG TCGCCAAGAA
GAACGTATAT TTTTAGAAGC TTCAAATGCC AAACTTGCTC AGTTAGGTAT TTCACCGCAA
TCACTTATCA ATGAATTACA AAAGCAAAAT ATTGTCCGTT CTGGCGGTGA AGTAAACACG
GGTGCCATCA GTTTTATTGT TGAGCCGTCA GGTAATTTCA ACAGCTTAGT TGAGATTGGT
GATACCTATA TCAGCATTCC TAATACTGAA GATTTTATCG CATTAAAAGA TGTCGTGACT
CTACGCCGTG ATTTTATCGA CCCACCCGAT AAAACCGCTT ATTTAAATGG TCAATCGGCG
ATATTTTTTG CAATTTCGAT GTTGCCAGAA AATAATCTTT TGGAATATGC CCCGCGTGTA
TTAAACAAAA TCAATGAAAT CGAATCAAGT TTACCTATTG GTTATAATCT TGAAATTGCC
ACTTATCAGG CCGACCAAGT GGCAAAAACC ATTAATGGTG TCTCTGTTAA TGTACTGCAA
ACCTTGGCTA TTGTATTAGT GGTTGTGATT CTATTTTTAG GTTTACGTAC TGGCTTGATT
GTTGGCGCTA TTGTGCCTTT TGTTATGCTA ACCACATTAA GCATAATGCA ATTTAGTGAT
ATGAAACTCG AACGAATGAG CTTAGCTACT CTTATTATCT CGCTCGGTTT ATTAGTCGAT
AATGGCATTG TTATCGCTGA AGATTTCAAG CGTCGCTTAG AAGATGGCGT AGATCGATAT
AACGCCATGT TGCAAGGTAG CAAAGAGTTA GCGATTCCCT TACTGAGCTC ATCAGTGACA
ACGGTTTTAT TTTTCTTACC ACTTATGTTG GCTGAACATG TTGCAGGAGA GTATACCCGC
TCTATCTCAC TGGTTATTTT AATTACCTTA CTTACCAGTT GGATATTGGC TTTATGTGTT
ACCCCTCTAC TGTGTTATTT CTTTATTACC CTACCGGAAA ATAAAAAAGC TAAAGTTGAA
AATAACGAGT CTACCCGTGA AGAGCCAGGT AAGTTTTACC GATACTATGA AACATTCTTG
CATTGGTTAC TTAAACATAA AGCCTTATTT ATGACCGCAA TGTTAGCGCT GTTCATTGGA
TCAATACTTT CAATGAAATA TGTCGCCAAA CAATTTTTTC CTGATTCAGA TCGTACTCAA
ATACTAGTAA ATATTGATTT ACCTAATGGC ACTTCATCCA CAGAAACCAA CCGTCAGATG
AAAGATATTT TCACTTGGTT GGAAGATGAA ACACGTTTTG ATTTTATCGA GAGTTACTCT
GCTTATGTCG GCTTTAGTGG CCCAAGATTT GTGATGTCAC TTAACCCTGA AGACCCAGCT
CAAAACAAGG GTTTCATGGT ATTAAACGTT AAAGATGAGA CGGATATTAG TGCAACGGTG
TTATCACTTG ATGAGCAAAT AGAACATGAT TTTCCTAACG TGTCAGCTCG CGTTAAAAAA
ATGTTTTTAG GGCCTTCCGA TTCAAGTACC ATTAAAATTC AAGTAAAAGG ACCAGATAAA
GAAGTTATCT ATAAAAAAGC ACAACAGATA ATGGCTGTTT TACACGATGT TCCCAATACT
ATTGATATAC GTACCGATTG GGAAAACCTG ATCACTAAAA TTGACGTGCA GATAGACCAG
CATAGAGCCA AACGTTCAGG CCTTACTTCT GAAGAAATAG CTCAGGCACT CGATGCCTAT
TTCTCCGGTT CGAAAATTAC TGAGTTTCGA GAAGGTGATA ACATTATCCC TGTTGTGCTG
CGTGCAGAGC AAGCAGAACG ACAAAGTTTA GATAGACTTA GAACGCTAAA TATTTATTCC
AATAAAACAG GGAAAACGGT GCCCTTGTTC CAAGTAGCGA ACTTAGCACC CTATAATCAA
TTTTCTATTA TTCACCATGA GGATCTTTTT CGTACCATCA GCATTCAAGC GAGAAACACC
GATGTTGCCG CAGAAGATCT TAAGTTAATT ATTGATGCAA AGATTCAAGC TTTAGCGGCT
GATTTACCGA TAAACCATAA CATTGAATAT GATGGTGTGA TTAAAGAGTC TCGTGCCGCT
CAAAAAGCGC TAGGTGCAAG TATGCCAATA GTATTAGGGT TAATATTAAT ATTATTAGTG
GCGCAGTTTA ATTCTTTTAG ACAAGCAGCG GTGATCACCT TAACTATCCC TCTGTCATTT
ATAGGTGCTG TATTAGGCCT ATTTTTGATG CAAGCTCCTT TTGGCTTTAT GGTTACCTTA
GGACTATATA GTCTAGCGGG TATTATCATT AATAATGCGA TTGTACTGAT TGACCGGATT
AAAATTGAAA CTGCATCAGG AAAGTCTGAC TATCAAGCCG TGGTAGATGC CTGTTTAACG
CGGTTACGTC CAATAGCTAT GACCACTATT ACTACCGTGA TGGGATTATT ACCCTTAATT
ATTGGTAAAG ATCCGTTGTT TTACGGTATG GCAAACGTGA TAGCTTTTGG TCTCGGTATT
GGTACCATAT TAACCTTAGC GGTAGTGCCT GCATTGTATT GTGGTTTTTA TAAAATCACT
GATGTTCAAG TAGAACCTGT ATAA
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| Protein sequence | MNITQVAFTY RKSVFLIIAV LLINGLFAYF TLPAQEDPTI TIREAIVSTS FPGMAPDRIE
QLITKKLEEE IRKIPQVKEI KSSSATGISI IHVKIYDRYF NLDDIWQNLR NKVTAAHNKM
PSGTHTPFVN DEFGDVSVVT LALTADGFDL GEMYDIAQHI RDTLYGVEGT KKIEILGRQE
ERIFLEASNA KLAQLGISPQ SLINELQKQN IVRSGGEVNT GAISFIVEPS GNFNSLVEIG
DTYISIPNTE DFIALKDVVT LRRDFIDPPD KTAYLNGQSA IFFAISMLPE NNLLEYAPRV
LNKINEIESS LPIGYNLEIA TYQADQVAKT INGVSVNVLQ TLAIVLVVVI LFLGLRTGLI
VGAIVPFVML TTLSIMQFSD MKLERMSLAT LIISLGLLVD NGIVIAEDFK RRLEDGVDRY
NAMLQGSKEL AIPLLSSSVT TVLFFLPLML AEHVAGEYTR SISLVILITL LTSWILALCV
TPLLCYFFIT LPENKKAKVE NNESTREEPG KFYRYYETFL HWLLKHKALF MTAMLALFIG
SILSMKYVAK QFFPDSDRTQ ILVNIDLPNG TSSTETNRQM KDIFTWLEDE TRFDFIESYS
AYVGFSGPRF VMSLNPEDPA QNKGFMVLNV KDETDISATV LSLDEQIEHD FPNVSARVKK
MFLGPSDSST IKIQVKGPDK EVIYKKAQQI MAVLHDVPNT IDIRTDWENL ITKIDVQIDQ
HRAKRSGLTS EEIAQALDAY FSGSKITEFR EGDNIIPVVL RAEQAERQSL DRLRTLNIYS
NKTGKTVPLF QVANLAPYNQ FSIIHHEDLF RTISIQARNT DVAAEDLKLI IDAKIQALAA
DLPINHNIEY DGVIKESRAA QKALGASMPI VLGLILILLV AQFNSFRQAA VITLTIPLSF
IGAVLGLFLM QAPFGFMVTL GLYSLAGIII NNAIVLIDRI KIETASGKSD YQAVVDACLT
RLRPIAMTTI TTVMGLLPLI IGKDPLFYGM ANVIAFGLGI GTILTLAVVP ALYCGFYKIT
DVQVEPV
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