Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0739 |
Symbol | holC |
ID | 3520840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 741391 |
End bp | 741864 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283204 |
Product | DNA polymerase III, chi subunit |
Protein accession | YP_267489 |
Protein GI | 71280374 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCAAA CTCAAGTAAT GTTTTATCTA CTTAAGGATG ATGTAACAGA CGAGAAAGAA GAAGATACTC GTTCTGCTAT TTATCATGCC TGTTTGCAAG CCAGTCATTT CTATCGTCAA AATCAGCGGG TCTATATTTA TGCAAAAGAC CAGCAACATG CTGAACAAAT TGATGAGATG CTTTGGGCAT TTGATAGCGA CAGTTTTGTA CCCCATAACC TCGTTGGTGA AGGTCCAAAA CAAGGCGCTA TGGTGGAAAT AGGTTATCAA GCACCGCAAG GACGTCGTCC TGTGCTTATT AACCTTAATA GTGCGGTGCC TAACTTTGCC AATCAATTTC AATTTATCGT TGATTTTGTG CCTAGTGATG AAACACTTAA ACAACAAGCG AGAGAACGCT TTAAAACTTG CCGACAATGG GGTTTTCAAG TTGATAACCA AGCGGTAACC GTGCCAGAGG AAGTCAGTAA ATAG
|
Protein sequence | MMQTQVMFYL LKDDVTDEKE EDTRSAIYHA CLQASHFYRQ NQRVYIYAKD QQHAEQIDEM LWAFDSDSFV PHNLVGEGPK QGAMVEIGYQ APQGRRPVLI NLNSAVPNFA NQFQFIVDFV PSDETLKQQA RERFKTCRQW GFQVDNQAVT VPEEVSK
|
| |