Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0738 |
Symbol | valS |
ID | 3521952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 738338 |
End bp | 741259 |
Gene Length | 2922 bp |
Protein Length | 973 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283203 |
Product | valyl-tRNA synthetase |
Protein accession | YP_267488 |
Protein GI | 71281480 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCAAC AAAACAACGA ACAACTATTA AACCTATTAC CGGATAAAAT GATGGAAAAA ACCTTTAACC CTACCGACAT TGAACAGTCC CTTTATACTA GCTGGGAAGA GCAAGGTTAC TTTAGCCCTA CAGGTGAAGG TGACAGTTAC AGTATTGCTA TTCCACCACC AAATGTTACT GGTAGCTTAC ATATGGGTCA TGCTTTTCAG CAAACCATCA TGGATACGCT TATTCGTTAC CAACGCATGC AAGGTAAAAA CACCTTATGG CAAACCGGTT GCGATCATGC TGGTATAGCA ACACAAATGG TAGTTGAACG TAAAATTGCG GCTGAAGAAG ATAAAACGCG TCATGACTAT GGTCGTGAAG GTTTTATCGA TAAAATTTGG GAATGGAAAG AAGAGTCTGG CGGCACCATA GGCAAACAAA TGCGCCGCTT AGGTAACTCT ATCGATTGGA GTCGTGAACG TTTTACTATG GATGATGGTA TGTCTGAAGC GGTACAAGAA GTATTTGTAC GCTTATTTGA AGACGATTTG ATTTATCGTG GTAAACGCCT GGTAAATTGG GATCCTAAAT TTCACACCGC TATTTCTGAT TTAGAAGTTG AAAATAAAGA CAAAAAAGGC CACATGTGGC ACTTGCGTTA TCCTTTAGCT AACGGTGCTA AAACAGCAGA AGGTCTCGAT TATTTAGTCG TAGCGACAAC ACGACCGGAA ACTATGTTAG GTGATACAGG GGTTGCAGTA AACCCAGAAG ATCCTCGCTA TAAAGACCTA ATTGGCAAGC AAGTATTATT ACCGTTAGTA AACCGATTGA TTCCAATTGT CGGTGATGAT CATGCCGATA TGGAAAAAGG CACTGGTTGT GTAAAAATCA CACCTGGCCA TGACTTTAAC GATAATGAAG TAGGTAAACG TCACGCATTG CCACAAATTA ACATCTTAGA TAAAGATGCT GCTATTTTAG CAACCGCTGA AGTTTATGAT ACTAAAGGTG AAGTTTGTAA CGCTTACGAT ACTGGATTAC CAAGCGAATT CGCTGGTATG GATCGTTTTG TAGCCCGTAA AGCTATCGTT GCTAAGTTTG ACGAGTTAGG TTTATTAGTT GAAGTAAAAG ACCATGATTT AGTTGCACCA TACGGTGATA GATCTGGCGT TATTATTGAG CCACTATTAA CGGACCAATG GTATGTACGT GTTGAAAAGT TAGCAGGCCC TGCTGTTGAT GCTGTTAAAG ATGGTCAAAT TGAATTTGTG CCTAAGCAAT ATGAAAATAT GTATTTTTCT TGGATGAACA ACATTCAAGA TTGGTGTATC TCACGTCAAC TTTGGTGGGG ACATAGAATC CCAGCTTGGT ATGACGAAAA CGAAAAAGTA TATGTTGGCC GCACAGAAGA AGAAGTACGC GCAAACAATG ACATTGCTGC TGATATGAAG TTAAGACAAG ACGATGATGT ACTTGATACT TGGTTCTCAT CTGCTTTATG GACGTTCTCA ACCTTGGGTT GGCCAAAAGA CACTGAAGAT TTAAAAACCT TCCACCCTAC TGATGTATTA GTCACTGGTT TTGATATTAT TTTCTTCTGG GTTGCCCGTA TGATCATGAT GACCATGCAC TTTAACAAAG ATGAAAACGG TAAAGCGCAA ATACCATTTA AGAAAATCTA CATGACAGGC CTTATTCGTG ATGAAAATGG CGATAAGATG AGTAAATCCA AAGGTAATGT TGTTGATCCT TTAGATATGA TTGATGGTAT TTCTTTAGAA GATTTATTGC AAAAACGTAC TGGCAATATG ATGCAGCCAA AGCTTGCCAA GAAAATTGAA AAGCTTACCA GAAAAGAATA TCCAGAAGGT ATTGAAGCGC ACGGTACTGA TGCTTTACGT TTCACGCTAA CGTCTGTTGC TACAACGGGT CGCGATATTA GCTGGGACAT GAAACGTCTA GAGGGTTACC GTAACTTTAC CAATAAGTTA TGGAATGCTA GCCGTTATGT AATGATGAAT ACTGAAGAAT TTGATTGCGG ACAGTCATCA CCTGAAGGAA AGGCTGGCGA CATGGAGCTT TCACTTGCTG ATCGCTGGAT CATAGGTCAA TTTGAGCAAA CTGTAAAAAC GGTTCATGAA GCCTTTGATA CTTATCGTTT CGACCTTGCC TCACAAGCTT TGTATGAATT TACTTGGAAT CAGTTCTGTG ATTGGTATTT AGAACTAACT AAGCCTGTCC TGTTCAAAGA AAATGAAGCA CAGCAACGTG GTACTCGCCA TACTTTAGTG AATGTTTTAG AAGCGTTATT ACGCTTGATG CACCCTATCA TGCCATTCAT CACTGAAACG ATTTGGCAAC GAGTTCAACC ATTAAGTGAT TTTAGTAAAA ATGGTGACTC GATTATGGTG CAAGCATTTC CTCAGTTTGA TGAGAGTAAA TGTGATCAAC AAGCCATTGA CGATTTAGAG TGGGTTAAAC AATTCATTAT TGCTATTCGT AACATTCGTG GTGAAATGGA CATCTCGCCA AGTAAAGAGT TGCCTGTATT GCTTAAAAAC GTAAATGATA ATGATCAACG TCGTTTGGAT GAAAACGAGC AGTTCTTAAG TTCGCTAGCA AAATTAGAAA GCATTACGGT ATTAGCGGAT GATGAACAAG GTCCAGCTTC AGCTTCAGCT GTAGTAGGTG ACTTATCAGT GCTAATCCCA ATGGCTGGCT TAATCGATAA AGAAGCAGAG CTTGCTCGTT TAGATAAAGC TATTGAGAAG CTTGAAAAAG AAGCCGGCAG AGTTCGCGGT AAATTAGGCA ATGAAAACTT TGTTAGTAAA GCCCCTGCAG CGGTTATTGA AAAAGAACAA GCAAAGTTAG CTGACGCTGA ATCTACACTT GCTAAAATAC TTGAACAAAA AATACAAATA GCCGCACTTT GA
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Protein sequence | MLQQNNEQLL NLLPDKMMEK TFNPTDIEQS LYTSWEEQGY FSPTGEGDSY SIAIPPPNVT GSLHMGHAFQ QTIMDTLIRY QRMQGKNTLW QTGCDHAGIA TQMVVERKIA AEEDKTRHDY GREGFIDKIW EWKEESGGTI GKQMRRLGNS IDWSRERFTM DDGMSEAVQE VFVRLFEDDL IYRGKRLVNW DPKFHTAISD LEVENKDKKG HMWHLRYPLA NGAKTAEGLD YLVVATTRPE TMLGDTGVAV NPEDPRYKDL IGKQVLLPLV NRLIPIVGDD HADMEKGTGC VKITPGHDFN DNEVGKRHAL PQINILDKDA AILATAEVYD TKGEVCNAYD TGLPSEFAGM DRFVARKAIV AKFDELGLLV EVKDHDLVAP YGDRSGVIIE PLLTDQWYVR VEKLAGPAVD AVKDGQIEFV PKQYENMYFS WMNNIQDWCI SRQLWWGHRI PAWYDENEKV YVGRTEEEVR ANNDIAADMK LRQDDDVLDT WFSSALWTFS TLGWPKDTED LKTFHPTDVL VTGFDIIFFW VARMIMMTMH FNKDENGKAQ IPFKKIYMTG LIRDENGDKM SKSKGNVVDP LDMIDGISLE DLLQKRTGNM MQPKLAKKIE KLTRKEYPEG IEAHGTDALR FTLTSVATTG RDISWDMKRL EGYRNFTNKL WNASRYVMMN TEEFDCGQSS PEGKAGDMEL SLADRWIIGQ FEQTVKTVHE AFDTYRFDLA SQALYEFTWN QFCDWYLELT KPVLFKENEA QQRGTRHTLV NVLEALLRLM HPIMPFITET IWQRVQPLSD FSKNGDSIMV QAFPQFDESK CDQQAIDDLE WVKQFIIAIR NIRGEMDISP SKELPVLLKN VNDNDQRRLD ENEQFLSSLA KLESITVLAD DEQGPASASA VVGDLSVLIP MAGLIDKEAE LARLDKAIEK LEKEAGRVRG KLGNENFVSK APAAVIEKEQ AKLADAESTL AKILEQKIQI AAL
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