Gene CPS_0732 details

Gene Information

• Locus tag: CPS_0732
• Symbol: ribB
• ID: 3521384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 733549
• End bp: 734658
• Gene Length: 1110 bp
• Protein Length: 369 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283197
• Product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
• Protein accession: YP_267482
• Protein GI: 71280915
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase; [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAA ATACCCCACA AGAAATCATC GCAGACATCG CCTTAGGTAA GATGGTTATT 
TTAATGGATG ATGAAGACAG AGAAAATGAA GGTGACTTCA TTATGGCCGC TGAAAAAGTG 
ACTCCTGCTG CTATCAACTT TATGGCAACC CATGGCCGCG GATTGATCTG TATGCCAATG 
AGCCGTGAAA AGTGTGAGAC ATTAAAACTG CCATTAATGG TAGATAAAAA TGAGGCACAG 
TTTAGTACTA ACTTTACTGT ATCAATTGAA GCTGCTACCG GTGTAACTAC AGGTATATCT 
GCTGCTGATC GTGCAACCAC TGTTCTTGCT GCTGCAAATA AAGAAGCGAC ACATCTTAGT 
ATCGTTCAAC CAGGTCATAT CTTCCCACTA ATAGCTAAAG ATGGCGGTGT ATTAAATCGC 
GCAGGTCATA CTGAAGCGAG TGTTGATTTA GCACGCATGG CAGGTTTTGA ATCAGCTGCG 
GTTATTGTCG AGATTTTAAA TGAAGATGGC ACGATGGCGC GCCGCTCTGA CTTAGAAGTC 
ATTGCACAAA AACACGATAT AAAAATGGGC ACTATTGCCG ATTTAATTGA ATTTAGAAAT 
GCTACAGAAA CAACCATCGA GCGAGTTTCT CAGTGTAAGC TTCCTACCGC TTTTGGTGAG 
TTTGATTTAA CCGTGTTTAA AGATACCATT GACGGTCAAG CGCACTTTGC TTTAACTAAA 
GGCGAAATTA AAGCGGATGA ACCGACTTTA GTACGTGTAC ATTTAGAAAA TACTTTTAGA 
GATTTATTAT TCAGTCAACG TGAAAGTATT TCGACTTGGC CAATAGCCAA TGCGTTAGAA 
AAAATTGCTA AAGAAGGCGG TGTACTTGTT TTACTCGGTA AGCATGAGTC ACCAAATGAG 
TTAATTAACT TGGTAGAAAA ATATGCCAAG ATTGATGCGG GTGAAACCGT AAAAGAAACT 
AATCGTCACA TTGGCTCTCG CAATGTTGGC GTTGGTTCAC AAATCTTAGC AAACTTAGGT 
GTGAGTAAAA TGCGTTTATT AAGTTCACAA ACAAAATATC ACTCATTGTC AGGTTTTGGC 
CTAGAAGTGG TTGAGTATAT TGCTGACTAG 

 

Protein sequence

MNLNTPQEII ADIALGKMVI LMDDEDRENE GDFIMAAEKV TPAAINFMAT HGRGLICMPM 
SREKCETLKL PLMVDKNEAQ FSTNFTVSIE AATGVTTGIS AADRATTVLA AANKEATHLS 
IVQPGHIFPL IAKDGGVLNR AGHTEASVDL ARMAGFESAA VIVEILNEDG TMARRSDLEV 
IAQKHDIKMG TIADLIEFRN ATETTIERVS QCKLPTAFGE FDLTVFKDTI DGQAHFALTK 
GEIKADEPTL VRVHLENTFR DLLFSQRESI STWPIANALE KIAKEGGVLV LLGKHESPNE 
LINLVEKYAK IDAGETVKET NRHIGSRNVG VGSQILANLG VSKMRLLSSQ TKYHSLSGFG 
LEVVEYIAD