| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0731 |
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| Symbol | ribE1 |
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| ID | 3520699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 732709 |
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| End bp | 733407 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283196 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_267481 |
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| Protein GI | 71280235 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAG GAATTATCGA AGCCGTTGGT ACTATATCGG CCATAAATGT TAATGCCCAA
GGAGCTCGTT TAGTTATTGC TACCAATAGC TTGGACATGA GTGATGTTAA ACTGGGCGAC
TCCATCGCAA CTAACGGTAT ATGCCTTACG GTTGTTGATT TTAATAATGG CAAAGGTAAT
GGCAGCTATA GCGCAGATGT TTCTAATGAA ACTCTACAGC GAACTGGTTT TGCAGGCTAT
AAAGTTGGCA GTAAAGTCAA TCTAGAAAAA GCGATGTTGG CAAGCACACG TTTTGGTGGC
CATATGGTTT CTGGCCATGT AGATGGTGTC AGTGAAATAT TAGCTATCAA TAATAACGGT
AATAGTATTG AATACTGGTT AAGTATGCCA AGTGATTTAG CACACTATAT TGCCGAAAAA
GGCTCTGTAA CTATTGATGG TACAAGTTTA ACGGTTAATG CGCTTGCTGA AGAGGGCTCA
AAAGGTCATT CACAAGGTAG TTTTCGATTA ACAATAGTGC CACACACGGT AAAAGAAACC
ATCTTTGCTG AGTATCAAGT AGGTAGCAAG GTCAACATCG AAGTGGACTT AATTGCGCGG
TACTTAGAAC GATTATTGAC TAAAAGTGGT GGGAATGAGC ATGCTCCAGC GTCGAATGTT
ACCGAATCCA TGTTATTAAA AGCAGGCTTT ATTAAGTAG
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| Protein sequence | MFTGIIEAVG TISAINVNAQ GARLVIATNS LDMSDVKLGD SIATNGICLT VVDFNNGKGN
GSYSADVSNE TLQRTGFAGY KVGSKVNLEK AMLASTRFGG HMVSGHVDGV SEILAINNNG
NSIEYWLSMP SDLAHYIAEK GSVTIDGTSL TVNALAEEGS KGHSQGSFRL TIVPHTVKET
IFAEYQVGSK VNIEVDLIAR YLERLLTKSG GNEHAPASNV TESMLLKAGF IK
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