Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0710 |
Symbol | |
ID | 3522083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 712904 |
End bp | 713473 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637283175 |
Product | putative lipoprotein |
Protein accession | YP_267460 |
Protein GI | 71281611 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3056] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.248042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTCA ATACACTTAA ATCAATAGCC CTAACCTTAT TGCTTACGAG CATTGTCGGC TGTAGTACTG CACCTACACA TTTAATTGTT TCACCTCAAG TTTATCTATC ACCCTCAAAT CAATTATCTG GCAAAGAAGC ACAGCTGAAC GTTGTTGATA TGCGAACTAG CCCGCATATC ATCCAGATAC TAGAAAAGGA TGAAGCGGCA ATCATTCTTT CTTCCGAGCA ACGCCTTGAA GATATTATTC AAGGACTATT AGTGAAGCAG TGGCAACAAC AAGGTTTATC TTTGGCTAGC TCAGCAAATA ATCAAATAAC CGTTTCCATA GAAAAAGCTA TTATCAGTGT TGATCAAGAA AGTGTCAGTT ACAGCACTCA AAGTGAAATT ATCATCAAAG TTTCAATTGA TAATACCAAA CAGACGCTAA CTAGCAGCTT TAAAAATAGA GCGCACAGTG AAGGTGCTCT TAACGCAGAT ATCGCGGTAT TAGAACGTGA ATTTAATCAA CATTTAAGTA CCTTGATAAA ACAAATTCTA ACCAGTAAAG ATATTAAAAC CTTCTTATAA
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Protein sequence | MNFNTLKSIA LTLLLTSIVG CSTAPTHLIV SPQVYLSPSN QLSGKEAQLN VVDMRTSPHI IQILEKDEAA IILSSEQRLE DIIQGLLVKQ WQQQGLSLAS SANNQITVSI EKAIISVDQE SVSYSTQSEI IIKVSIDNTK QTLTSSFKNR AHSEGALNAD IAVLEREFNQ HLSTLIKQIL TSKDIKTFL
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