| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0706 |
|---|
| Symbol | |
|---|
| ID | 3519120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 710302 |
|---|
| End bp | 711582 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637283171 |
|---|
| Product | putative ampG protein |
|---|
| Protein accession | YP_267456 |
|---|
| Protein GI | 71278279 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00901] AmpG-related permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAA TGCCCACAAC TAGCCAAGTA GACAACAGTT CCTTTAAAGA GGCTATTTTA
AATAAGCGCA TGCTTATTTG TATTTTTACT GGCTTTAGCT CAGGTCTACC ACTGTTTGTT
TTATATCAAT TGGTTCCAGG CTGGTTACGT GATGAAGGGG TAAGTCTTAC TGAGATTGGA
CTTTTCTCAT TAATTGGCAT TCCTTATGTG TGGAAATTCC TTTGGTCACC ACTCATGGAC
CGCTACTCTC TGGGCATACT TGGCCGACGA CGAAGTTGGA TGTTAGTAAC ACAACTTTTA
CTGTTAGGCT CTATTGCTGG TTTTGGCTTT GTGAATCCTA TAATGGATAT ATGGTCTGTC
GCTTATTTAG CTGCAGCAGT GGCTTTTTTC AGTGCCAGCC AAGATATCGT GCTTGATGCC
TATCGACGAG AGTTATTACC CGATAACGAG CTTGGCTTAG GTAACTCAGT TCATGTTCAG
GCATACCGAC TTTCTGGACT GGTACCGGGA TCACTCGCTT TTATTCTAGC CGATCATATG
AGTTGGCAGT CGGTCTTCGT GATAGTTGCA GCTTTCATGT TATTAGGCGT ATTACTAACA
CTGTTCATTA AAGAGTTAGA CTCTGAGCAT GCTGCACCTA AAAGCCTGCG AGAAGCTATT
GTCTTACCAT TCAAAGACTT CGTTCAGAGT AAAGGGCTTA AATCTGCAGG TTATACGCTA
TTGTTTCTTG TACTTTATAA GTTAGGAGAC AATATGGCGA CAGCATTGCA AACGCCATTT
TTCATTGATA TGGGCTTTAG CAAAACTGAA ATAGGTGTTG TTGCCAAGAC CTCCTCATTA
ATTGCAATGA CCATTGGTAT AGTCGTTGGC GGCTTAGTGA TGGTTAAGCT CAGCATTAAT
CGAGCGCTAT GGTTATTCGG TTTTGTACAA ATTTTAAGTA TTTTAGGCTT TGCTGCCCTC
GCTGAAATTG GACATAACAC CTATGCTTTA GCCATCGCTA TGGGATTTGA GTATTTAGGC
GTTGGTTTAG GCACCGCTGC TTTCACAGCT TTTATTGCTA AAACGACTAA TCCCGCCTTT
GCAGCAACAC AAATTGCCTT ATTTACTGCC TTAGCCGTAG TACCACGTAC TTTTGCTAAT
GCCACAACAG GAGTCATTGT TGAAGCAATA GGTTGGACAA ATTTCTATTT TCTTTGTACG
GCTTTAGCTG TTCCAGGTAT GTTGATGTTA CTTAAAGTTG CCCCTTGGAA TGAGACATCC
CTTAATTCGA GCACAAGTTA A
|
|---|
| Protein sequence | MPQMPTTSQV DNSSFKEAIL NKRMLICIFT GFSSGLPLFV LYQLVPGWLR DEGVSLTEIG
LFSLIGIPYV WKFLWSPLMD RYSLGILGRR RSWMLVTQLL LLGSIAGFGF VNPIMDIWSV
AYLAAAVAFF SASQDIVLDA YRRELLPDNE LGLGNSVHVQ AYRLSGLVPG SLAFILADHM
SWQSVFVIVA AFMLLGVLLT LFIKELDSEH AAPKSLREAI VLPFKDFVQS KGLKSAGYTL
LFLVLYKLGD NMATALQTPF FIDMGFSKTE IGVVAKTSSL IAMTIGIVVG GLVMVKLSIN
RALWLFGFVQ ILSILGFAAL AEIGHNTYAL AIAMGFEYLG VGLGTAAFTA FIAKTTNPAF
AATQIALFTA LAVVPRTFAN ATTGVIVEAI GWTNFYFLCT ALAVPGMLML LKVAPWNETS
LNSSTS
|
|---|
| |