| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0684 |
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| Symbol | |
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| ID | 3521315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 685986 |
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| End bp | 688091 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283149 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_267434 |
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| Protein GI | 71280846 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.507206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA CATCCACCAC TAATATGGCA AGTTCACTTT TAATGCTAAT AGCGGCAATG
CCTGTCACGA CATTGGCAGC ATCAGAAGAA AGTTCAGAAA AAAATGCCAG TAAAAACATG
GTTAAAGCAA CAGATAAAAA AGCAAAAGCT CAAGATATTG AAGTTATCGA AGTCACCTCA
AGACGTAATC AAGCCAACAG TGAGATGACT GAACAAACTG AGCAGTTAAT GAGTGTTGCC
GGTATTGGCA ATGACCCATT AAGCGCCGTT TATAGTTTAC CCGGTATTGT TTATGCTGGT
GGTGATACTG GTTCACCTGC AGTGCGCGGA TCTTCACCTG AAGATAATGC CTTTTACATT
GATGACATGC CCGCAGGTTA CATATTCCAT TTATTTGGCG ACAGTATTTT TAATGAAAAC
CTTATTCAAG ATTTCACCTT ACATCCAGCG GCATTTGGCA GTGAATATGG CAATGCCACT
GGCGGTGTTT TTGATGTGCA ATTACGCGAT CCTCGACAAA AGGATATCAC CACTACCGTT
GATTTAAGCA TGCTCAAAAG TGGCGTTATG GTCGAAGGTG AAACCTTTGA AGACCAAGCT
TTCTACGTGT CTTATCGTCG TAGTCAAATC CATTTATTTT TACCTGAAGG TGAAGAAGAC
GAAGGATATA CGGTATTTAA AGCCCCGATA AGTGAAGATT ACCAGGGTAA ATATCAGTGG
CTCATTGGTG ATGCTCACAA ACTTACCTTA AGTGCTTCAG GTGCTAGTGA TACTGGTGGC
ATTAATATTT CTGAAAATTC AGAAGAAGGT CGAATTGACC CTGATAGTGT CGGTGATTTT
AAAATAACAA CCAAATTTGA TAGCCAAAGT CTTTCATGGC AATACTATGG CGATGAAGAA
AAAATAATGC AGTTAGTCGC AGGTCATACG GTCAATACAA CTGACCAGAT TTTTGGTAAA
GGGCAGTTTA TCAAAGTTGA TGAAGAATCC TATAATGTGC GTTTTTCATC ACAAATCACC
TGGCTTGATA ATCATAAGTT AGGTTTTGGC TTTGACTACA GTAAATCAGA TGTTGATTAC
AGTTTCGATA TGATCCCTTA TTACTGTACG GAAAATGATG CCGACTGTAA TGAAAACAAA
GGTGATCGCA TTCAAGATGT TGCCACCCTC ACCGATGAAG ATATAGCAGT TTATGTTCAT
GATATTTGGC AGTTAAGTGA TGCTTGGCAG CTGACTGTTG GCCTAAGAGC TGAACGTAAC
GATTACACTG GCCAAAATTT TGTTCATCCT AGGTTAGCCT TAGATTGGTT CGCTACTGAT
GACTTAACCT TTAAGGCAAA GGCAGGTACT TATAGCCGTT TTCCTGATGT TGATACCGCG
TTAAATAAAC TAGGCAACCC AAAGATAAAA TCACCACAAG CAACACATTA CTCATTAGGT
GTTGATTATG ATTTAAATGG CATTTGGTTC ACCTCACTTG ATATCTACCA TAAAGAGTTA
ACTAAATTGC CCCGCTCTGT TGATGAAAAT ACCGCTGTAG AGGATGCTGA AGTGCACTAT
ACCAATGATA CCTCAGGCGA TGCACAAGGG GTTGAATGGT TAGTTAGGCA CGAACGACAT
AATGGCTGGT TTGGCTGGGC ATCATTAAGT TGGTCTCAAA GTCAACGTAC GGACGACTTG
ACTAATGTCA CTGCTGATTA CTACTTAGAT ACGCCTCTGG TCGCCAATGT TGTTGTCAAT
TATGAGTTAA ATGAACGTTG GGATTTCGGT TTACGTTTCA CTCTGCGCAG TGGCGCAAAA
TACACGCCTA TCGTTGGTTT ACGTGAAAAC CCTGACTATG AGGACCATTT TTTACCAACA
TATGGTGAGT TAAACGCCAA AACGTTACCG GTATATCATC GCTTAGATTT AGAAGCTAAT
TACAAGACAA ACTATTGGGG CTACGACGCG CAATGGACTT GGGCTATTAT CAATGCCATG
GCACAGAAAA ATGTCTCAGG TTACTACTAC GATCCTAGTG ATAACGACAG CCTGACTGAA
TACAATGTCT CAGGTGAAGA AGATATCGGC GTATTTCCCT ACATTGGTTT AAAGATGACT
TTTTAG
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| Protein sequence | MKATSTTNMA SSLLMLIAAM PVTTLAASEE SSEKNASKNM VKATDKKAKA QDIEVIEVTS
RRNQANSEMT EQTEQLMSVA GIGNDPLSAV YSLPGIVYAG GDTGSPAVRG SSPEDNAFYI
DDMPAGYIFH LFGDSIFNEN LIQDFTLHPA AFGSEYGNAT GGVFDVQLRD PRQKDITTTV
DLSMLKSGVM VEGETFEDQA FYVSYRRSQI HLFLPEGEED EGYTVFKAPI SEDYQGKYQW
LIGDAHKLTL SASGASDTGG INISENSEEG RIDPDSVGDF KITTKFDSQS LSWQYYGDEE
KIMQLVAGHT VNTTDQIFGK GQFIKVDEES YNVRFSSQIT WLDNHKLGFG FDYSKSDVDY
SFDMIPYYCT ENDADCNENK GDRIQDVATL TDEDIAVYVH DIWQLSDAWQ LTVGLRAERN
DYTGQNFVHP RLALDWFATD DLTFKAKAGT YSRFPDVDTA LNKLGNPKIK SPQATHYSLG
VDYDLNGIWF TSLDIYHKEL TKLPRSVDEN TAVEDAEVHY TNDTSGDAQG VEWLVRHERH
NGWFGWASLS WSQSQRTDDL TNVTADYYLD TPLVANVVVN YELNERWDFG LRFTLRSGAK
YTPIVGLREN PDYEDHFLPT YGELNAKTLP VYHRLDLEAN YKTNYWGYDA QWTWAIINAM
AQKNVSGYYY DPSDNDSLTE YNVSGEEDIG VFPYIGLKMT F
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