| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0667 |
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| Symbol | |
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| ID | 3518462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 667020 |
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| End bp | 669401 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283132 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_267417 |
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| Protein GI | 71279021 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCC TACCTATAGC AAAAAGCATT ATCGCAATGT CGGTTGCCTC AGCGTTATTA
GTTAATAACG TGGCAGCAGA AGAGCTGAAT GAATCAACAG TTGATACCAA AGATGTTGAG
GTGATTGAAG TTAGAGGCGG TCAACGGGTT AAAACCCTGC GAGAAGTGCC GGCTTCTGTC
AGTGTCATTA GTGGTGAATC ATTAAGCCAA ATGAAAATTA ATAAGTTAGA CGACTTATCT
CAGTCTTTAC CTAACGTTAG TATTTCTGAA AATGCGGTAC AAGATACTAT TTCTATTCGT
GGGGTTAATT CAGATCTTCA AGCGGGCGGT GAGCAATCGG TCGGCATATT TTTAGATGGT
GTTTATCATG GGAGAGGTGT GCAATCACGT TTTTCGTTTA TGGATGTTGA TGCTATTGAA
GTATTACGTG GCCCTCAAGG AAGTTTATTT GGTAAAAATA CCGTGGGTGG TGTTATCAGC
ATTTTGCCAG CACAACCGAA AGATTATTTT GAAGCAAAAC TAACTGCAGC TTATGAATTT
GAATATGAAA AAGTCGACTA TTCAGGCTAT GTAACCGGGG CACTTAACGA GAGTGGATCT
TTAACGGGGC GTTTTGCTTT TAAGGGATCA AATAGCGAGG AAGGTTGGGT TGAAAATGAA
GCCAATGGCG AAACCATGCC GACCAAGGAA GATAGCGCTT TACGCGGTAT TTTAAATTGG
CAGGTAAACG ATGACTTTAA AGTTAACTTA CGTGCAGAAA ATGGCACATT TGAGACAAAA
GGAGCCCCTT ATGAAATCCT CTACTTGGAA GACAGCCAAC CCATAACAGG GCTCGCTAGA
ATGTTTGGCG CAGAAGCCAA TATTGATGGT AAAACCAATA TTTCAAATGG TAATTACCCT
GGCTTAGGCT TTAATGGCGA AGAAACACCT TATTTCATGG ATGCTAATTT TAGTGAATAT
GCGCTAAAAA GTTACTATAA AATAGATCAA GGCACCATTA GCGCCACCAT AGCACAATCT
AATTTAGATT TTGTTCGCTC TCAAGATGCT GATTTTGGTC CTTTACCCGT CATACAGTTT
AGTGAATCAG AAGACTACCA ACAGAACAGC GTAGAGTTAA GATTTGTTTC AGAAGATAAC
GATGACTTTG AATATTTATT TGGTGTCTTT TGGCAAAACA GTGACTTATT AGTTGATGCG
GTTGCTGACT TTGCCACAGC TCCGGGTACT CCTGTTGCGG GCGCCTTTCC TATTCCTATT
GAGCACGCGG TAACCAGTCG TTTTAATGAA CTTGAACAAG AAACCGATTC GTTAGCATTA
TTTGGCCAAG TTACTTTTGG CTTAACAGAG TCGCTGAAAC TTGAACTGTC AGGGCGTTAT
TCAAAAGAAG AAAAAACAGG TCGTCAAACA GTAGAAGTAT ACGGCGGTAC GGGTGATGGC
AGTAAGAGCG GTTTACCATT AACTAACCCG ACTGAGCTTT TCATTTGGAG TCAGGCCATT
ATGGAAGCGT TCCCGCATTC AGTACCGGTG AGTCGAGAAG AAAACCTATT TTCACCTTCT
GCTAGTTTAA CTTGGCTTGC CTCTGACTCG GCCAGTTTTT ATGTCTCAGT GAGTAAAGGT
TTTAAAGGCG GCGGTTTTAA TGCTATTGCT ATGTCGCCTG ATTTAGATGA AATTGAATAC
GAAAATGAAG AGGCTATTTC TTCTGAAATT GGCGGTAAAT TTGAATTTTT CGATGGTACT
GTGCTGTTAA ATACCGCTAT ATTTAATGTT GCTTATGACA ATATGCAGAC CACATTATTT
ACTGGCGGAA CAACGTTTGT TGTTGAAAAT GCAGCAAAAG CTACCTCTCG TGGTCTTGAG
GCTGAATTAC GATGGTTAAT AAACGACGAA TTTACCTTAG ATGCTAACCT TGGTTACATT
GATTTTGAAT TCGACGATTA TAAGAATGCA GGTTGTACAG CACAGCAAGT GATTGACTCA
GGTTTGACGG GCTCAGCTTG TGCCGCTGCG GGGCTGAATG ATCTTTCAGG TAAAACCAAT
CAAGATGTGC CTGAAATAAC GTTATCGCTA AGTTTACAAC ATGAGTTTGC CATAAACGAA
TATGTGGTCA CTAGCCGTAT TGATAGCAAC TATGTTGATG ATTTCTTTGC TACTGCAGAT
TTAGACCCTA TTACGGTGCA AGAAGCTTAT ATTGTTTGGA ATGCCGCAGT AAGTATCGCT
TCGTCTGATG GTCTTTGGAA AACAGATCTT ATCTTTAAAA ATATAACCGA TGAAAGCTAT
TTTTATTACG CCAATGATGT ACCGCTATTT GCAGGTTCGC AATTTGCTTC CTTCAGTCAA
CCTAGCACGG TAACACTGCA ATTTAGTTAC TTATTTGAAT AA
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| Protein sequence | MNILPIAKSI IAMSVASALL VNNVAAEELN ESTVDTKDVE VIEVRGGQRV KTLREVPASV
SVISGESLSQ MKINKLDDLS QSLPNVSISE NAVQDTISIR GVNSDLQAGG EQSVGIFLDG
VYHGRGVQSR FSFMDVDAIE VLRGPQGSLF GKNTVGGVIS ILPAQPKDYF EAKLTAAYEF
EYEKVDYSGY VTGALNESGS LTGRFAFKGS NSEEGWVENE ANGETMPTKE DSALRGILNW
QVNDDFKVNL RAENGTFETK GAPYEILYLE DSQPITGLAR MFGAEANIDG KTNISNGNYP
GLGFNGEETP YFMDANFSEY ALKSYYKIDQ GTISATIAQS NLDFVRSQDA DFGPLPVIQF
SESEDYQQNS VELRFVSEDN DDFEYLFGVF WQNSDLLVDA VADFATAPGT PVAGAFPIPI
EHAVTSRFNE LEQETDSLAL FGQVTFGLTE SLKLELSGRY SKEEKTGRQT VEVYGGTGDG
SKSGLPLTNP TELFIWSQAI MEAFPHSVPV SREENLFSPS ASLTWLASDS ASFYVSVSKG
FKGGGFNAIA MSPDLDEIEY ENEEAISSEI GGKFEFFDGT VLLNTAIFNV AYDNMQTTLF
TGGTTFVVEN AAKATSRGLE AELRWLINDE FTLDANLGYI DFEFDDYKNA GCTAQQVIDS
GLTGSACAAA GLNDLSGKTN QDVPEITLSL SLQHEFAINE YVVTSRIDSN YVDDFFATAD
LDPITVQEAY IVWNAAVSIA SSDGLWKTDL IFKNITDESY FYYANDVPLF AGSQFASFSQ
PSTVTLQFSY LFE
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