Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0651 |
Symbol | |
ID | 3522831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 649884 |
End bp | 650666 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283116 |
Product | DNA-binding response regulator |
Protein accession | YP_267401 |
Protein GI | 71282358 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.53482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGATA ATATTCTAAT AATTGAAGAC GAAATTGATA TTGCCAAACT TATTAAGGTG CATTTATCTG AATTAGATTT GAATTGCGAT ATTTGTACAC AAGGAAACGA AGCATTACAA CAAGCGTTAA CAAAAGACTA TCAGCTTATT TTGCTTGATG TGATGTTGCC TGGTATTAGC GGCTTAGATA TTTGTCGACA AGTTAGACAA GAAAAGCCGT TACAGTCCAT TATTATGCTT ACTTCTAAAA CATCAGAAAT AGACCGTATA TTGGGCCTTG AGTTGGGGGC TGATGACTAT ATGACTAAAC CTTTCAGTGT TCGTGAATTA CAAGCCCGCG TTAGAAGCCA ATTACGCAGA GTCCATGCAA TTACCGCTAA AAACGCCTCT GAAATTAATA GCTTGGTACA TGAAGAAAAA CCAGTTCAAG AATCGGCTCA GTTAGATAAG ACAAGTACAT CGATAGGACA ACTATTGGTT GATCATAGAT TTCATCAAGT CACTTATAAA AATAAAGCAA TTAACTTAAC GGTTACAGAA TTTGAATTGA TTGATTTTTT CTGTCAACAC CCTGATCAGG TATTCTCACG CGCTCAATTA CTCGATGGTG TTTGGGGTTA CCATCATAAT GGTTATGAAC ACACGGTTAA CTCTCATATT AATCGCCTTA GAAGTAAGCT TGAGGAAGAC TGTACTGAAC CAAAAATAAT TCAGACCGTC TGGGGAGTTG GTTATAAACT TAATTCAGCG GGCGTAATGC CATCAACGGT ATGTAAGGAC TGA
|
Protein sequence | MKDNILIIED EIDIAKLIKV HLSELDLNCD ICTQGNEALQ QALTKDYQLI LLDVMLPGIS GLDICRQVRQ EKPLQSIIML TSKTSEIDRI LGLELGADDY MTKPFSVREL QARVRSQLRR VHAITAKNAS EINSLVHEEK PVQESAQLDK TSTSIGQLLV DHRFHQVTYK NKAINLTVTE FELIDFFCQH PDQVFSRAQL LDGVWGYHHN GYEHTVNSHI NRLRSKLEED CTEPKIIQTV WGVGYKLNSA GVMPSTVCKD
|
| |