| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0621 |
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| Symbol | secY |
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| ID | 3521449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 619717 |
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| End bp | 621054 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637283086 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_267371 |
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| Protein GI | 71280980 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.104459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACAC CAGGAACGGC TACCTCACAA GGTAGTAAGG GCGCAGGCGG TTTGTCTGAG
CTTAAACAAA GATTATGGTT CGTATTCGTT GCCTTAGTTG TGCTTCGTTT AGGGTCTTTT
GTGCCAATCC CTGGTATTGA CGCCGCTGTA TTAGCTCAGT TCTTTGAACA ACAAAAGGGC
ACTATCGTAG AGATGTTTAA CATGTTCTCC GGTGGTGCAC TTGAGCGAGC CTCAGTGTTG
GCACTTGGTA TTATGCCGTA CATCTCAGCT TCGATTATTA TGCAATTGCT TACTGTGGTT
CATCCCGCAA TGGCAGAGCT TAAAAAAGAA GGTGAAGCTG GACGTCGTAA AATCAGTCAA
TACACACGCT ACGGCACTTT AGTTCTAGCA ACAGTACAAT CAATAGCGAT TGCCAGAAGT
TTACCGGAAA TGATGCAAGG GCTTGTTATT AATGCAGGCT TTAGTTTCTA TTTCACCGCA
GTAATTAGTT TGATCACTGG TACCATGTTT TTAATGTGGT TAGGTGAACA AATTACTGAA
CGCGGTATCG GTAATGGTAT TTCGATTATT ATTTTTGCAG GTATTGTTGC TGGCATGCCA
TCCGCGGTTG GTCAAACAGC TGAAATGGCG CGTCAAGGTG AATTGCACTT ATTAGTATTA
TTGCTTATAG GCGTTGTGGT ATTTGCAGTA ACTTTCTTAG TAGTATTTGT GGAACGTGGT
CAACGACGTA TTGTTGTTAA CTACGCTAAA CGTCAGCAAG GCCGTAAGGT GTTTGCTGCG
CAAAGTACCC ATTTACCTTT GAAAGTGAAT ATGGCTGGTG TTATACCGCC AATCTTTGCC
TCAAGTTTAA TCTTGTTTCC AGGCACGCTT GCGAGCTGGT TTGGTCAAGG TGACGGCCCC
GTTGCTGACT TCTTACAAGG TGTTTCAGGA GCTATGTCTC CAGGACAACC TTTGTATGTA
ATGATGTTAG CAGCAGCAAT TATATTTTTC TGTTTCTTTT ACACGGCTCT TGTTTTCAAT
CCGCGTGAAA CTGCAGATAA CTTGAAAAAG TCTGGTGCGT TCATTCCAGG GATTCGTCCG
GGTGAACAAA CATCCAAATA TATTGATAAA GTCATGACAC GTTTAACCCT TTGTGGTGCG
GCGTATATTA CCTTTGTCTG TTTGGTTCCA CAGTTTATGA TCATGGCATG GGACGTACAG
TTCTATTTCG GCGGGACATC TTTATTGATT ATCGTAGTAG TGATTATGGA CTTTATGGCA
CAAGTACAAA CGCATATGAT GTCTCATCAA TATGACAATG TACTTAAAAA AGCGAACTTG
AAAGGCTATG GTCGTTAG
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| Protein sequence | MATPGTATSQ GSKGAGGLSE LKQRLWFVFV ALVVLRLGSF VPIPGIDAAV LAQFFEQQKG
TIVEMFNMFS GGALERASVL ALGIMPYISA SIIMQLLTVV HPAMAELKKE GEAGRRKISQ
YTRYGTLVLA TVQSIAIARS LPEMMQGLVI NAGFSFYFTA VISLITGTMF LMWLGEQITE
RGIGNGISII IFAGIVAGMP SAVGQTAEMA RQGELHLLVL LLIGVVVFAV TFLVVFVERG
QRRIVVNYAK RQQGRKVFAA QSTHLPLKVN MAGVIPPIFA SSLILFPGTL ASWFGQGDGP
VADFLQGVSG AMSPGQPLYV MMLAAAIIFF CFFYTALVFN PRETADNLKK SGAFIPGIRP
GEQTSKYIDK VMTRLTLCGA AYITFVCLVP QFMIMAWDVQ FYFGGTSLLI IVVVIMDFMA
QVQTHMMSHQ YDNVLKKANL KGYGR
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