Gene CPS_0620 details

Gene Information

• Locus tag: CPS_0620
• Symbol: rplO
• ID: 3520445
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 619276
• End bp: 619710
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637283085
• Product: ribosomal protein L15
• Protein accession: YP_267370
• Protein GI: 71279982
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.527453
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTAA ATACTTTATC CCCTGCACCG GGATCTCACA AAGCTAGAAA ACGCTGTGGT 
CGTGGTATTG GTTCAGGCAT CGGTAAAACT GGTGGTCGTG GTCATAAAGG TCAGAAATCT 
CGTTCTGGCG GTAGTGTACG TCCAGGTTTT GAAGGTGGTC AAATGCCATT GAAACAACGT 
TTACCTAAAT TTGGTTTTAC TTCACGTAAA TCTTTAGTTC GCGCTGAAGT TCGTTTACAC 
GAATTAAACC TTATCACTGG TGATGTTGTT GATATTCATG CACTTAAAGA CGCTGGCCTA 
ATTACACGTA ATATCGTAGC TGTTAAAGTT ATGTTATCTG GCGAAATTAC TCGTCCAATT 
ACATTACGTG GTATTGCAGT AACTAAAGGC GCACAAGCAG CTATTGAAGC TGCTGGTGGC 
AAAGTAGAGG AATAA 

 

Protein sequence

MHLNTLSPAP GSHKARKRCG RGIGSGIGKT GGRGHKGQKS RSGGSVRPGF EGGQMPLKQR 
LPKFGFTSRK SLVRAEVRLH ELNLITGDVV DIHALKDAGL ITRNIVAVKV MLSGEITRPI 
TLRGIAVTKG AQAAIEAAGG KVEE