Gene CPS_0618 details

Gene Information

• Locus tag: CPS_0618
• Symbol: rpsE
• ID: 3519484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 618578
• End bp: 619087
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637283083
• Product: ribosomal protein S5
• Protein accession: YP_267368
• Protein GI: 71278175
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAATC ATAATCAAGA AAACTCACAG CAAAGTGATA TGGCTGAAAA GCTAATTGCC 
GTTAACCGCG TTTCAAAAGT GGTTAAAGGT GGTCGCATAT TCAGTTTTAC TGCACTAACA 
GTAGTTGGTG ACGGTAATGG TCGCGTTGGT TTTGGTTACG GTAAAGCACG TGAAGTGCCT 
GCTGCAATCC AAAAAGCAAT GGAAAAAGCG CACCGTAACA TAGTAACGAT TGACTTGAAG 
GGTACTACTC TTCAACATGT TATTACGGGC AAACATTCTG GTTCTAAAGT CTTCATGAAA 
CCAGCTTCTG AAGGTACAGG TATCATCGCC GGTGGCGCGA TGCGTGCAGT ACTTGAAGTT 
GCAGGCGTTC AGAACGTATT GTCAAAAGCA TACGGTTCTA CTAACCCAAT CAACGTAGTT 
CGCGCTACTG TTTCTGCCCT AGTGAATATG CATTCACCAG AAGGCATGGC AGCTAAACGT 
GGCAAACGCG TTGACGAAAT TTTGGGGTAA 

 

Protein sequence

MANHNQENSQ QSDMAEKLIA VNRVSKVVKG GRIFSFTALT VVGDGNGRVG FGYGKAREVP 
AAIQKAMEKA HRNIVTIDLK GTTLQHVITG KHSGSKVFMK PASEGTGIIA GGAMRAVLEV 
AGVQNVLSKA YGSTNPINVV RATVSALVNM HSPEGMAAKR GKRVDEILG