| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0603 |
|---|
| Symbol | |
|---|
| ID | 3522093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 605760 |
|---|
| End bp | 607271 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637283068 |
|---|
| Product | serine carboxypeptidase |
|---|
| Protein accession | YP_267353 |
|---|
| Protein GI | 71281621 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGC TAAGTTTATC ATCCAGCCCT GTTTTAGCTG CTCAAGAGTC TGAGCAACGG
CAAAATAAAC ATGAACGCAA ACTGGCTATC GATGAGAAAA ACATCACAAA GCACAGCACT
AAGGTCAATG GACAGAAGTT TAAATATACT GCGACTACAG GAACGCAGCC TGTTTGGGAC
GAAGAAGGTA ATCCAATCGC GAGTTTGTTT TATACCTACT ACCAACGAAG TGATGTAAAA
GATAGCGCTA AACGTCCATT GGTAATTTCC TTTAATGGCG GGCCAGGCTC TGCTTCAGTC
TGGATGCATG TGGCTTATAC TGGCCCCAGA GTGCTCAATG TGGACGATGA AGGTTATCCA
TTACAGCCTT ATGGCGTAAA GACTAATCCC TATTCAATTT TAGATGTTGC GGATATTGTT
TTTGTTAACC CGGTAAATAC GGGCTACTCA CGTGTGTTGG CTGGTAAAGA CGGAGAAATG
CCAAGTAAAG AGCAGCAGAA AAAAATGTTC TTTGGCGTTA ATGCTGATAT TAACTATTTA
GCCGAGTGGC TTAATACCTT TGTAACGCGA AATAATCGCT GGCGCTCACC TAAATATTTA
ATTGGTGAAA GCTATGGCAC TACACGTGTT GCCGGTTTGG CCAAAGAGCT ACAAGAACGT
CAATGGATGT ATGTTAATGG CGTGATTTTA GTTTCACCAA CCGATATTGG TATCAAACGA
GATGGACCGG TAAAAGCGGC AAATAGACTG CCTTACTTTA CTGCTGCCGC TTGGTACCAC
AAAGCCTTAA CTCCTGCGCT TCAACAAAAG CCTTTAGCAG AACTACTTGC AGAAGTTGAA
ACCTTTACAC TTAGTGAATA TTTACCAGCT TTGGCTAAAG GCGGCTTTAT TACCGCACAA
GAAAAGCAAG TTATTGCTGA GCAAGTTGCA AATTATGCCG GTTTATCAGT AACAGCCGTT
ATTAATAATA ATTTAGATAT CGATAATTCA TTTTTCTGGA AAGAATTATT ACGAGATAGA
AAGCAAACTA TTGGCCGTTT AGATTCTCGC TACTTGGGAA TTGATAAAAA AGTTGCTGGC
TCTAGTCCTG ATTATAATGC TGAATTAAGC TCATGGTTAC ACAGCTTTAC CCCAGCAATT
AATTATTATT TACGTGAAGA ATTAAATTAT AAAACAGATA TTAAATACAA TATGTTTGGC
AACGTCCGTC CGTGGGACCG TACTGGCAAT AAAACCGGTG AGGGACTTCG CTCTGCCATG
GCACAAAACC CGTATTTACA AGTGATGATT CAATCAGGGT ATTTTGATGG TGCAACAAAT
TATTTCGATG CTAAATATAC CATGTGGCAA TTAGATCCAA GTGGTTTGAT GAAAGATAGG
TTGTCATTTA AAGGGTATGA GAGTGGTCAT ATGATGTATT TACGTCATGA AGACCTACGA
GATGCTAATC AAGACATTCG TGAGTTTATT AAGAAAAGTT TGCCGGCGAA AGGACAAGCA
GCCAAATACT AA
|
|---|
| Protein sequence | MVMLSLSSSP VLAAQESEQR QNKHERKLAI DEKNITKHST KVNGQKFKYT ATTGTQPVWD
EEGNPIASLF YTYYQRSDVK DSAKRPLVIS FNGGPGSASV WMHVAYTGPR VLNVDDEGYP
LQPYGVKTNP YSILDVADIV FVNPVNTGYS RVLAGKDGEM PSKEQQKKMF FGVNADINYL
AEWLNTFVTR NNRWRSPKYL IGESYGTTRV AGLAKELQER QWMYVNGVIL VSPTDIGIKR
DGPVKAANRL PYFTAAAWYH KALTPALQQK PLAELLAEVE TFTLSEYLPA LAKGGFITAQ
EKQVIAEQVA NYAGLSVTAV INNNLDIDNS FFWKELLRDR KQTIGRLDSR YLGIDKKVAG
SSPDYNAELS SWLHSFTPAI NYYLREELNY KTDIKYNMFG NVRPWDRTGN KTGEGLRSAM
AQNPYLQVMI QSGYFDGATN YFDAKYTMWQ LDPSGLMKDR LSFKGYESGH MMYLRHEDLR
DANQDIREFI KKSLPAKGQA AKY
|
|---|
| |