| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0582 |
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| Symbol | |
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| ID | 3520084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 583573 |
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| End bp | 584793 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637283047 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_267332 |
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| Protein GI | 71279625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.224366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTG ATATAAAAAG GCTAGTGGAT AATTTTTGTT CATTGGCTGT TCTTAAGATA
TTTAACCTAT TATTACCCTT GGTTACCTTG CCCTACTTAT TGAAAACTCT AGAACTAAAT
AATTATGGCG TTATAGTTCT TGCGCTTTCA TTAATTATGT ATTTTCAGAC TATAACTGAA
TACGGCTTTA ATTTGTCTGC TACGAGAGAA ATAGCAAAAA ATAGGAGTAG TGCGGCTCGT
TTAGAGTTTA TCTATAGTAA GGTTGTCTGG TGTAAGTTGT TACTTTTAAT TATTAGTCTG
CTAGTTTTAG TCGTCGTTGT TTTTTTTACA CCAAAGCTTT TTGAGTCTAA AACAACCTTT
TTACTAACAG GTTTGATTCT TATAGGGCAC TCTATGTTCC CTGAATGGTT TTTTAGAGGC
ATGGAACAAA TGAGGTACAT TACTCTTTTA GATTTATGTA TTAAGTTACT TTTTACTATT
GGGGTTTTTG TTTTTATTAA CAATGAAGGT GATGGTTGGT TATATCCATT ATTGCTTGGA
AGTGCCTATA TTACCGTTTC GATTTTGTCA CATTTACTTA TTTATTATAA ATTTAATGTC
TCTTTAAAAC TTGTAAAATT TATGGTTATC TACAGAACAT TGAAAAATAC TTTTCCACTT
TTTATCAATC AATTTTTCCC AAATTTATAT AATAATACTA CAACATTTCT CGTGGGTATG
ATGCTTGGCA ATCATGCTGT TGGTTTGTTC GGGGCGATTA AACAAGTTGC TTCATTGTTG
AATGTTTTTA ACTCAGTAAT TACAGCGGTT ATATTTCCAT ACTTGAATAG GAATAAAGAT
AAATTTAACC TGTATTGTAA ATATTATTTG CTTTTACTTT TTACAGTATC ATTACTTTTT
ATTTTTGTTG GGCAGTATGT GTTTCTACTC CTAGAGATAA ATGATGAAAT TGTGAATAAG
GTATTTTTAA TACTTATAAT TGGTATATTC AACATTGGTA TCTATAGTGT TTTTGCCACA
AACTACCTTA TAATACATAA AAAAGATAAA CTAGTTATGA AAATAACGGT AATTACTTCT
CTAATTGGTT TTTCATTATC ATACCCGTTC ATTCACCTTT TTGGTTTGAC GGGAGCTGCA
TTAACTGTAT GTACTAGCCA GTTTTTGTTA GGGACGATTT CATTTGTTTT TTATAAGAAA
AACAATGAAA GAAATATTTA G
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| Protein sequence | MNIDIKRLVD NFCSLAVLKI FNLLLPLVTL PYLLKTLELN NYGVIVLALS LIMYFQTITE
YGFNLSATRE IAKNRSSAAR LEFIYSKVVW CKLLLLIISL LVLVVVVFFT PKLFESKTTF
LLTGLILIGH SMFPEWFFRG MEQMRYITLL DLCIKLLFTI GVFVFINNEG DGWLYPLLLG
SAYITVSILS HLLIYYKFNV SLKLVKFMVI YRTLKNTFPL FINQFFPNLY NNTTTFLVGM
MLGNHAVGLF GAIKQVASLL NVFNSVITAV IFPYLNRNKD KFNLYCKYYL LLLFTVSLLF
IFVGQYVFLL LEINDEIVNK VFLILIIGIF NIGIYSVFAT NYLIIHKKDK LVMKITVITS
LIGFSLSYPF IHLFGLTGAA LTVCTSQFLL GTISFVFYKK NNERNI
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