Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0580 |
Symbol | |
ID | 3521801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 581041 |
End bp | 583320 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283045 |
Product | tyrosine-protein kinase |
Protein accession | YP_267330 |
Protein GI | 71281329 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.298329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATCG ATGAAAATAT AGTTAAACCT ACCGTTCGTA ATCAGCAGGG TAATAATACT TCAAATAACG CCCCTGCTAA TGAAATTGAT TTGATGGCGC TTTTTGGTGC GCTTATTGAT CGTAAAATAT TTATTGTGTC AATAACCACG CTATTTGCTG TGATTGGTAT TGCTATAGCC ATATTTTCTA CACCGATTTA TAAAGCCACA GCCATGATCC AGGTAGAAGA AAGTGGCGGT TCAGTGCCAG GTTTAGATGA CATGGCGGGT ATGTTTGAAA GTAGTTCTAA GTCAATAACA GAAATAGAGC TATTAAAATC TCGCTCAGTT ATTGGTGAAG CGGTTGATAC CTTAAAATTA GATATAGTTG CGGTACCTAA ATTATTCCCT GTCATTGGTG GCCGAAGTTT TAGAAAATTT AACCCAATCA AAGAAGGTGA TCTTGCTGCA GCAAGTTTTG GTGCAACAAG TTATGCGTGG GGCGGTGAAC AAATTGAAGT ATTCCGGTTT GACGTACCAC AATATGGAAT TGATAAAGAA TACATAATAC AAGCAAGTGA TAATCAGAGC TTCAAATTGC TCTCTGAAGA CGGCAAAGTT ATTTTACATG GTAAAGTAGG TGAAGAGTTA TCAAATGACC GTTTTTCAAT AACATTAAAA ACCCTAGTAG CAAGAGCTGG CACAGAATTT ATTGTTACCC GTAAAGATCG CTTAAATACT ATTGTTGATC TACAAACGGC TATTGGTGCC AGTGAAAAAG GTAAAGATTC TGGCATCGTG AACTTAAGCT TTCAACATGA AACACCAGAA TATGCTGAAG GTGTTTTGAA CAAAACTGCT GAAATTTATG TACTGAGAAA TGTTGACAGA AACTCAGCCG AAGCTAAAAA GTCACTCGAT TTTTTAGAGG TTCAGTTACC CGAAATTAAA AAACAGCTAG AAAGTTCAGA AGCATTATTT AATGACTATC AACGAGATCA ACAATCAGTC AACATTACCT TAGAAACACA AGGCGTTCTA GAACAAATTG TTGAACTGGA TACCAAGTTA CAAGAATTAG ACCTTAAACG TTTAGCTATG TCTCGCATGT TCAAACGTAA CCATCCTAAT TATCAAGGCA TTGTTGAGCA AATAGAAGCG GTACAAAAAC AACGTGATGG CTTAGCGGGT AAAATTTCAA ACTTACCTGA AATGCAGCAA AAATTATTGC GTTTAACGCG TGATGTTGAA GTTGGTAATG AAATTTATAT GATGCTGCTG GGTAAAGTGC AAGAGTTAGA TATTGTACGT GCAGGCACTG TCGGTAATGT ACGTATTATT GATGTGGCAG AAGTGAATAC TATTAAACCA GTAAAACCGA AAAAAGCCTT GATAGTGGTA ATGGCCACTC TGGTAGGTGG TATGTTAGCT ATTGCTATTG TGCTAGTGCA AAAGGCATTA CATAAAGGCG TTGAAGACCC TAGCGAGATA GAAGCTATTG GCATGCCTGT TTATGCCAGT GTACCATTCT CTATGCATCA AGATAAATTA ACAGGCTTAA CTAAGGCTTT AACCAAAGGC CGTAAACGTA AAGCAAATCA AAGCCATAAT GATAAGAGTA ATGTATTGGC TGTTGATAAT CCTGCTGACT TATCAATAGA GGCACTTCGT AGCCTACGTA CCAGTTTGCA CTTTGCAATG ATGGAAGCAA AAAATAATGT TATTGCCATA TCAGGCCCTT CTCCAGGTGT AGGTAAATCA TTTATCTCAG CTAATCTTGG TGCAGTATTG GCTCAAAGTG GTCAGAAGGT TCTAGTCATT GATGCTGATA TGAGAAAAGG CTATTTACAA AAACAGTTTG GTATAGTGTG GGAAAACGGT TTGTCAGATT ACTTATCAGG ACAACAAACG CTGGAGCAAG TGACCAAAGC AACCAATGTT GAAGGGCTAA GTGTTATTAC ACGTGGTCAA GTACCACCAA ATCCTTCCGA ATTATTAATG CACAGTAATT TTAGTGACTT AATTACAGAA ATAAAAGCTA AATACGATAT TATTCTTATA GATACTCCAC CTATACTAGC CGTGACAGAC CCCGCTATTG TCGGTGGTCA TGCTGGCACC ATGTTATTGG TTACACGCTT TGGTCAAAAT GCGATTAAAG AAATTGACTA TGCCCGTCAG CGCTTTGAAC AAAATGGCAT TGATGTAAAA GGTGTGGTAT TTAATGGCGT AGTGAAAAAA GCAAGTAATG CCTATGGTTA TTATGGTTAT TATAACTATG AATATAAATC GGATAAGTAA
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Protein sequence | MSIDENIVKP TVRNQQGNNT SNNAPANEID LMALFGALID RKIFIVSITT LFAVIGIAIA IFSTPIYKAT AMIQVEESGG SVPGLDDMAG MFESSSKSIT EIELLKSRSV IGEAVDTLKL DIVAVPKLFP VIGGRSFRKF NPIKEGDLAA ASFGATSYAW GGEQIEVFRF DVPQYGIDKE YIIQASDNQS FKLLSEDGKV ILHGKVGEEL SNDRFSITLK TLVARAGTEF IVTRKDRLNT IVDLQTAIGA SEKGKDSGIV NLSFQHETPE YAEGVLNKTA EIYVLRNVDR NSAEAKKSLD FLEVQLPEIK KQLESSEALF NDYQRDQQSV NITLETQGVL EQIVELDTKL QELDLKRLAM SRMFKRNHPN YQGIVEQIEA VQKQRDGLAG KISNLPEMQQ KLLRLTRDVE VGNEIYMMLL GKVQELDIVR AGTVGNVRII DVAEVNTIKP VKPKKALIVV MATLVGGMLA IAIVLVQKAL HKGVEDPSEI EAIGMPVYAS VPFSMHQDKL TGLTKALTKG RKRKANQSHN DKSNVLAVDN PADLSIEALR SLRTSLHFAM MEAKNNVIAI SGPSPGVGKS FISANLGAVL AQSGQKVLVI DADMRKGYLQ KQFGIVWENG LSDYLSGQQT LEQVTKATNV EGLSVITRGQ VPPNPSELLM HSNFSDLITE IKAKYDIILI DTPPILAVTD PAIVGGHAGT MLLVTRFGQN AIKEIDYARQ RFEQNGIDVK GVVFNGVVKK ASNAYGYYGY YNYEYKSDK
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