Gene CPS_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0580 
Symbol 
ID3521801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp581041 
End bp583320 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content38% 
IMG OID637283045 
Producttyrosine-protein kinase 
Protein accessionYP_267330 
Protein GI71281329 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.298329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCG ATGAAAATAT AGTTAAACCT ACCGTTCGTA ATCAGCAGGG TAATAATACT 
TCAAATAACG CCCCTGCTAA TGAAATTGAT TTGATGGCGC TTTTTGGTGC GCTTATTGAT
CGTAAAATAT TTATTGTGTC AATAACCACG CTATTTGCTG TGATTGGTAT TGCTATAGCC
ATATTTTCTA CACCGATTTA TAAAGCCACA GCCATGATCC AGGTAGAAGA AAGTGGCGGT
TCAGTGCCAG GTTTAGATGA CATGGCGGGT ATGTTTGAAA GTAGTTCTAA GTCAATAACA
GAAATAGAGC TATTAAAATC TCGCTCAGTT ATTGGTGAAG CGGTTGATAC CTTAAAATTA
GATATAGTTG CGGTACCTAA ATTATTCCCT GTCATTGGTG GCCGAAGTTT TAGAAAATTT
AACCCAATCA AAGAAGGTGA TCTTGCTGCA GCAAGTTTTG GTGCAACAAG TTATGCGTGG
GGCGGTGAAC AAATTGAAGT ATTCCGGTTT GACGTACCAC AATATGGAAT TGATAAAGAA
TACATAATAC AAGCAAGTGA TAATCAGAGC TTCAAATTGC TCTCTGAAGA CGGCAAAGTT
ATTTTACATG GTAAAGTAGG TGAAGAGTTA TCAAATGACC GTTTTTCAAT AACATTAAAA
ACCCTAGTAG CAAGAGCTGG CACAGAATTT ATTGTTACCC GTAAAGATCG CTTAAATACT
ATTGTTGATC TACAAACGGC TATTGGTGCC AGTGAAAAAG GTAAAGATTC TGGCATCGTG
AACTTAAGCT TTCAACATGA AACACCAGAA TATGCTGAAG GTGTTTTGAA CAAAACTGCT
GAAATTTATG TACTGAGAAA TGTTGACAGA AACTCAGCCG AAGCTAAAAA GTCACTCGAT
TTTTTAGAGG TTCAGTTACC CGAAATTAAA AAACAGCTAG AAAGTTCAGA AGCATTATTT
AATGACTATC AACGAGATCA ACAATCAGTC AACATTACCT TAGAAACACA AGGCGTTCTA
GAACAAATTG TTGAACTGGA TACCAAGTTA CAAGAATTAG ACCTTAAACG TTTAGCTATG
TCTCGCATGT TCAAACGTAA CCATCCTAAT TATCAAGGCA TTGTTGAGCA AATAGAAGCG
GTACAAAAAC AACGTGATGG CTTAGCGGGT AAAATTTCAA ACTTACCTGA AATGCAGCAA
AAATTATTGC GTTTAACGCG TGATGTTGAA GTTGGTAATG AAATTTATAT GATGCTGCTG
GGTAAAGTGC AAGAGTTAGA TATTGTACGT GCAGGCACTG TCGGTAATGT ACGTATTATT
GATGTGGCAG AAGTGAATAC TATTAAACCA GTAAAACCGA AAAAAGCCTT GATAGTGGTA
ATGGCCACTC TGGTAGGTGG TATGTTAGCT ATTGCTATTG TGCTAGTGCA AAAGGCATTA
CATAAAGGCG TTGAAGACCC TAGCGAGATA GAAGCTATTG GCATGCCTGT TTATGCCAGT
GTACCATTCT CTATGCATCA AGATAAATTA ACAGGCTTAA CTAAGGCTTT AACCAAAGGC
CGTAAACGTA AAGCAAATCA AAGCCATAAT GATAAGAGTA ATGTATTGGC TGTTGATAAT
CCTGCTGACT TATCAATAGA GGCACTTCGT AGCCTACGTA CCAGTTTGCA CTTTGCAATG
ATGGAAGCAA AAAATAATGT TATTGCCATA TCAGGCCCTT CTCCAGGTGT AGGTAAATCA
TTTATCTCAG CTAATCTTGG TGCAGTATTG GCTCAAAGTG GTCAGAAGGT TCTAGTCATT
GATGCTGATA TGAGAAAAGG CTATTTACAA AAACAGTTTG GTATAGTGTG GGAAAACGGT
TTGTCAGATT ACTTATCAGG ACAACAAACG CTGGAGCAAG TGACCAAAGC AACCAATGTT
GAAGGGCTAA GTGTTATTAC ACGTGGTCAA GTACCACCAA ATCCTTCCGA ATTATTAATG
CACAGTAATT TTAGTGACTT AATTACAGAA ATAAAAGCTA AATACGATAT TATTCTTATA
GATACTCCAC CTATACTAGC CGTGACAGAC CCCGCTATTG TCGGTGGTCA TGCTGGCACC
ATGTTATTGG TTACACGCTT TGGTCAAAAT GCGATTAAAG AAATTGACTA TGCCCGTCAG
CGCTTTGAAC AAAATGGCAT TGATGTAAAA GGTGTGGTAT TTAATGGCGT AGTGAAAAAA
GCAAGTAATG CCTATGGTTA TTATGGTTAT TATAACTATG AATATAAATC GGATAAGTAA
 
Protein sequence
MSIDENIVKP TVRNQQGNNT SNNAPANEID LMALFGALID RKIFIVSITT LFAVIGIAIA 
IFSTPIYKAT AMIQVEESGG SVPGLDDMAG MFESSSKSIT EIELLKSRSV IGEAVDTLKL
DIVAVPKLFP VIGGRSFRKF NPIKEGDLAA ASFGATSYAW GGEQIEVFRF DVPQYGIDKE
YIIQASDNQS FKLLSEDGKV ILHGKVGEEL SNDRFSITLK TLVARAGTEF IVTRKDRLNT
IVDLQTAIGA SEKGKDSGIV NLSFQHETPE YAEGVLNKTA EIYVLRNVDR NSAEAKKSLD
FLEVQLPEIK KQLESSEALF NDYQRDQQSV NITLETQGVL EQIVELDTKL QELDLKRLAM
SRMFKRNHPN YQGIVEQIEA VQKQRDGLAG KISNLPEMQQ KLLRLTRDVE VGNEIYMMLL
GKVQELDIVR AGTVGNVRII DVAEVNTIKP VKPKKALIVV MATLVGGMLA IAIVLVQKAL
HKGVEDPSEI EAIGMPVYAS VPFSMHQDKL TGLTKALTKG RKRKANQSHN DKSNVLAVDN
PADLSIEALR SLRTSLHFAM MEAKNNVIAI SGPSPGVGKS FISANLGAVL AQSGQKVLVI
DADMRKGYLQ KQFGIVWENG LSDYLSGQQT LEQVTKATNV EGLSVITRGQ VPPNPSELLM
HSNFSDLITE IKAKYDIILI DTPPILAVTD PAIVGGHAGT MLLVTRFGQN AIKEIDYARQ
RFEQNGIDVK GVVFNGVVKK ASNAYGYYGY YNYEYKSDK