| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0578 |
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| Symbol | |
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| ID | 3521273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 579384 |
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| End bp | 580511 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283043 |
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| Product | polysaccharide biosynthesis/export protein |
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| Protein accession | YP_267328 |
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| Protein GI | 71280804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.809222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATAT CCTCTAAAAA AGTAATTGTC TCACTAGCCT TATTGTTATT GAGCGGCTGT
AATATTATCC CTGGCAGTCA TATGGAAGGC GTTGATGTAG AACCTGAGAC ATCTACACTT
GAACAAGACC TCTCAAATAT AAATATCTCT GTTATAGACT CTTCATTAAT ATCTCGATTA
AAAGACAGCC AACAAACTTA TTCTCAAGCT AAAAAATATA CACCAGTAGT TACAGATACG
TATGATTACG TGCTGGGTGT TGGTGATGTT TTATCTATTG GTGTTTGGGA CCATCCAGAA
TTAACTATTC CTGCCGCAGT ACAACGTACC GCAGAATTTG ATGGTTTTAG AATTCAAGCC
GATGGCACTA TCACCTATGC GTATGCTGCC AATGTACCTG CAGCGGGTAA AACAATCAGA
GAATTACACA ATGTTTTAGT AGCAAAGCTC AGTGAGGTTA TTGAAAAACC ACAATTAGAC
CTTAAAGTGG TTGGCTTTAA GAGTCAGCGA ACGTATGTTA CTGGCGAGGT GAAAAGACCT
GGTGTTTTCG CTATCAGTGA AATACCTTTA ACGTTAATCG ATGCACTCAA CCTCGCGGGT
GGTTTAAGTG AAAGAGCTGA TTGGCGCACG GTTAGTTTTA CTCGAGATAA TCAAGTACAA
ACCATCAAGT TAGATGATTT TTATACCAAG GGTGATATTT CTCAAAACCG CTTATTAAAA
CATGGTGATA TTATTCATGT TAATCGTACT GATAATCAAA AAGTATTTGT ATTGGGTGAT
GTAAGCAAAG CTGGCAGTAT TGAAATTAAC CGTTATGGCT TAAGCCTTGC GGAAGCGTTA
AGCGACGTAG GCGGTTTAAA TGAAAGAACC GCCAATGCTA ACGGGGTATT TGTGTTGCGT
AAACGCCCAG ATAATGAAGA AGGCATTATT GCCGATGTGT ATCAATTGTA TGCACAAAAT
GTAGTGGCAC TGGTGTTAGC TGATCAATTT AAATTGCAAC CGCGTGATAT CGTTTATGTG
ACCACTGCAC CTATTGCACG TTGGAATCGT TTGATTAGCC AATTAGTACC AACAGTGCAA
GCACTGGAAA GTATTTCAAC GATTAAAACT CAAGGAAACT TTTTCTAA
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| Protein sequence | MLISSKKVIV SLALLLLSGC NIIPGSHMEG VDVEPETSTL EQDLSNINIS VIDSSLISRL
KDSQQTYSQA KKYTPVVTDT YDYVLGVGDV LSIGVWDHPE LTIPAAVQRT AEFDGFRIQA
DGTITYAYAA NVPAAGKTIR ELHNVLVAKL SEVIEKPQLD LKVVGFKSQR TYVTGEVKRP
GVFAISEIPL TLIDALNLAG GLSERADWRT VSFTRDNQVQ TIKLDDFYTK GDISQNRLLK
HGDIIHVNRT DNQKVFVLGD VSKAGSIEIN RYGLSLAEAL SDVGGLNERT ANANGVFVLR
KRPDNEEGII ADVYQLYAQN VVALVLADQF KLQPRDIVYV TTAPIARWNR LISQLVPTVQ
ALESISTIKT QGNFF
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