| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0550 |
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| Symbol | |
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| ID | 3522222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 547968 |
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| End bp | 548984 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637283015 |
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| Product | NifR3/Smm1 family protein |
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| Protein accession | YP_267308 |
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| Protein GI | 71281750 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000498133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG GTACTTATCA ACTTAATTCG CAGGTAATGC TTGCCCCTAT GGCAGGGATC
ACCGATCAAC CTTTTAGACA ATTATGTTGT CAATTGGGCG CGGGTTTAGC AGTGTCCGAA
ATGCTTTCGT CAAATCCGAA AGTATGGAAC ACCGAAAAGT CTAAATTGAG AATGCTGCAT
GGTGATGCTG CGGGTATCCG CAGTGTACAA ATTGCCGGAA GTTGTCCTGA TGAGTTAGCG
TTTGCTGCCA AAGTAAATGC TGATAACGGC GCACAGATTA TTGATATCAA TATGGGCTGC
CCGGCAAAAA AGGTAAATAA GAAATTAGCG GGTTCTGCTT TGTTAAGAGA ACCAGCACAG
GTTGAGCGTA TTGTTCAGTC AGTGGTGAAC GCGGTAGATA TACCGGTCAC GCTAAAAATT
CGCACAGGAT GGTGTGAAGA TACCCGTAAT GGTATTGAAA TAGCAAAAAT TGCTGAAAAC
AGTGGTATAG CATCACTCGC AGTGCATGGC CGTACACGTA ATGACTTTTA TAAAGGCAAT
GCGGAATACG ACACTATTAA AGCAATTAAA TTGGCTATTT CAATTCCGGT AGTGGCAAAT
GGTGATATTA CGTCACCTGA AAAAGCACTA CAGGTTTTAG ACCATACGGG CGCGGATGCC
ATAATGGTTG GTCGTGGTGC ACAGGGTCGT CCGTGGATTT TTCGAGAAAT TAATTATTTC
TTGGCCACGG GTAATAAGAT GTCTGCACCC GAATTGAGCG AAGTTCGTTC AATTGTATTG
GCACACGTTA TGGAGTTACA TCAGTTTTAC GGCGATTTCA AAGGTGTGAT GATCGCCAGA
AAACATGTTT CTTGGTATGT ACAAAACCTA GTTGAGACCC TAGACGGTTT TAGCACAGCG
TTTACTATTG ACCAAGGCAA AGCGTTTAGG GCTATTTTTA ATAGTTTAAC GTCTACCGAT
GAACAATTGG TGACGTTAGA CAAATTTTTT GATGACTTTA CTACTGGCTC TTATTAG
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| Protein sequence | MKIGTYQLNS QVMLAPMAGI TDQPFRQLCC QLGAGLAVSE MLSSNPKVWN TEKSKLRMLH
GDAAGIRSVQ IAGSCPDELA FAAKVNADNG AQIIDINMGC PAKKVNKKLA GSALLREPAQ
VERIVQSVVN AVDIPVTLKI RTGWCEDTRN GIEIAKIAEN SGIASLAVHG RTRNDFYKGN
AEYDTIKAIK LAISIPVVAN GDITSPEKAL QVLDHTGADA IMVGRGAQGR PWIFREINYF
LATGNKMSAP ELSEVRSIVL AHVMELHQFY GDFKGVMIAR KHVSWYVQNL VETLDGFSTA
FTIDQGKAFR AIFNSLTSTD EQLVTLDKFF DDFTTGSY
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