| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0516 |
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| Symbol | |
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| ID | 3519817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 515464 |
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| End bp | 516198 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637282981 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_267274 |
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| Protein GI | 71279362 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.567639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA AAGCAACATT AATCGTTGGA GCTAATAGCG ATATTGCAAA GGCATTAGCA
CTAAAAATCA TCAACTCTGA ATACCCCCAA TTGATTATCG TTAGCCGTGA TATCACTTTT
TATCAGCAAG CATTATTTAG TCAAGCCATT CTCATTGAAA CAGCCAGTTA TAACGACGAA
GATATAGGTA AAGTAGCTGA TACGATCAAG CAAATAGGTG CTAGAGATAT ATCACGCGTT
TTCATATGTC ACGGAGTATT ACACAGTAAA AGTTATCAAC CGGAAAAGCG TTTAGAAGAT
TTTTCAGCTG AAGCTTTTAT TAAAGTGATT AATGCTAACA CCATTACCCC AATGTTATGG
TTAAAACACT TAACACCATT ACTCGCTTCC CAACATCGCT GTAAAATAAT CATCTTTACC
GCAAGGGTTG GTAGTATAAG CGATAACAAA TTAGGGGGTT GGTATAGTTA TCGTTCTTCA
AAGGCTGCAA TGAATATGTT AATAAAATCA GCTGCGGTAG AATTAGCACG AAGAGCAAAA
AACATTAAAT TGATTTCTTT TCATCCCGGT ACAACTGACA CACCACTTTC CAAGCCTTTT
CAGGCAAACG TACCCCAAGG TAAATTGTTT ACCTGTGAAT TTGTTGCAAA GCAATTATTA
ACGATTGTTG AAGATACGGT CATTGATGGA GAAGCAAGCT TTCTTGATTG GCAAGGCAAA
GATATCCCGT GGTGA
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| Protein sequence | MTNKATLIVG ANSDIAKALA LKIINSEYPQ LIIVSRDITF YQQALFSQAI LIETASYNDE
DIGKVADTIK QIGARDISRV FICHGVLHSK SYQPEKRLED FSAEAFIKVI NANTITPMLW
LKHLTPLLAS QHRCKIIIFT ARVGSISDNK LGGWYSYRSS KAAMNMLIKS AAVELARRAK
NIKLISFHPG TTDTPLSKPF QANVPQGKLF TCEFVAKQLL TIVEDTVIDG EASFLDWQGK
DIPW
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