Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0506 |
Symbol | |
ID | 3519793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 507211 |
End bp | 508845 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282971 |
Product | putative sucrose phosphorylase |
Protein accession | YP_267264 |
Protein GI | 71279338 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATTAT CAAGCGAGGT GGTGGTTGTA AAACCTTTTA CCAACCAATG GTCCGAGGAA GATATTATTT TGATCACCTA CGGTGATAGC ATTATCAAAG CAGATCAACC GCCATTACAA ACATTAAAGC ATTTTTTAGA CACTACCATT GAAAATACCA TTAATAGTGT TCACATTTTA CCCTTTTTCC CCTACAGCTC AGATGATGGT TTTGCCGTTA TTGATTATTC TTCAGTCAAT GAATCTTTAG GAACATGGCA AGATATAGAA GATATCAGTA AAGACTATCA CTTGATGTCA GATCTTGTGA TTAACCACTG CTCCAGCCGA AGTGCTTGGT TTGATAACTT TGTTAAAGGA GAAGGTCAAG GTAGCGATTA TTTTTTCACT GCACTACCCG ATGATAATTT AACAGATGTA GTGCGCCCAC GTACCTCACC ATTACTCAAA GAAGTTGAAA CGGGTAATGG CAAAAAATTT GTCTGGTGCA CCTTTAGCCA CGACCAAGTC GACTTTGATT TTCGTAACCC TGAAGTATTA GCGGCATTTA CGTCAATCAT CAGGCAGTAC CTAGACATCG GCGTTAAGAT ATTCCGCTTA GATGCTATCG CCTTTTTATG GAAAGTAACA GGTACTACCT GCATCAATTT ACCTGAAACA CATGAGGTTG TTCGGTTATT GAGAACTCTC ATTGAATCGG CTGAACCTCA AGCGATTATC ATCACCGAAA CAAATATCCC TAATACCCAA AACCTGACGT ACTTTGGTAA TGCTAACGAA GCGCACGGCA TTTATAACTT TTCATTACCG CCCCTTCTAT TAAACACCCT ACTCACAGGT AATTGCTTAT ATTTAAAACG TTGGTTAATG AGTATGCCTC CGTCACAAGA CGGCACCCTA TATTTTAATT TTATTGCCTC ACATGACGGT ATTGGTTTAC GTCCGGCTGA AGGTTTATTA AGTGAAAATG AACTTGATAC CTTAGTGCAC ACGGTAGAAA ATTTTGGTGG TAAAATTTCA TGGCGTACTT CTGATACTGG CGAGCAAAAA GCGTACGAGA TGAATATCTC ACTCTATGAT GCGATGCAAG GGACGGTTGA TGGAAAAGAT CAATGGAATT TTGAACGTTT TATTTGTGCA CATGCCATTA TGTTTGCTCT TGAAGGCATA CCAGGTATTT ATATTCATAG TCTGTTGGGT ACGCAAAACG ACTATCAAAA ATTAGCAAAT ACCCACCATA ACCGGTCTAT TAATCGACGT CGTTGGCAAG AAAATGCTTT AGAAGAGGCA CTCGCTAATA AAAGTTTACA TCATGCACGA GTTCTCTCGA CGTTAAAATC ATTATTAAAT ACTCGCATTA AGCAACCAGC CTTTCATCCC AATGCGACGC AGTTTACACT TCATTTAGGT TTACAACTAT TTGGCTTTTG GCGACAAAGC CAAGATAGAA AACAAAGTAT TTTTTGTGTC AGTAATGTTT CTGATCAACC CATAACACTG CCATTAAGTG AGCTTAATTT AATTATTACG GAATCTTGGT TTGAGCTTAT TAGCAAGAAA GAAATCACTG AATTAACACA AAAAATACTA TTAACACCTT ATCAAACAGT TTGGATCAGT AATGTAATAA CATAA
|
Protein sequence | MRLSSEVVVV KPFTNQWSEE DIILITYGDS IIKADQPPLQ TLKHFLDTTI ENTINSVHIL PFFPYSSDDG FAVIDYSSVN ESLGTWQDIE DISKDYHLMS DLVINHCSSR SAWFDNFVKG EGQGSDYFFT ALPDDNLTDV VRPRTSPLLK EVETGNGKKF VWCTFSHDQV DFDFRNPEVL AAFTSIIRQY LDIGVKIFRL DAIAFLWKVT GTTCINLPET HEVVRLLRTL IESAEPQAII ITETNIPNTQ NLTYFGNANE AHGIYNFSLP PLLLNTLLTG NCLYLKRWLM SMPPSQDGTL YFNFIASHDG IGLRPAEGLL SENELDTLVH TVENFGGKIS WRTSDTGEQK AYEMNISLYD AMQGTVDGKD QWNFERFICA HAIMFALEGI PGIYIHSLLG TQNDYQKLAN THHNRSINRR RWQENALEEA LANKSLHHAR VLSTLKSLLN TRIKQPAFHP NATQFTLHLG LQLFGFWRQS QDRKQSIFCV SNVSDQPITL PLSELNLIIT ESWFELISKK EITELTQKIL LTPYQTVWIS NVIT
|
| |