Gene CPS_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0484 
Symbol 
ID3520263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp486776 
End bp489025 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content41% 
IMG OID637282949 
ProductTonB-dependent receptor 
Protein accessionYP_267242 
Protein GI71279802 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.698636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTA CTCTAAAACC TATTGCTCTC GCTGTTAACC TCACCATCTT AGGTAGCAGT 
GCTATGGCGC TTCCTGCTTT AGCGCTCCCA TTTGTAGCAA ATACGGCTCA AGGCACGATT
AAAGATATTG AAGTCATCAC TATCTCAAAT CAGCGTCATA ATTCTCTCGT AGACAATCAA
AGTTACGCGC AAGGTAAAAC TACCGAAGCT GATTTAGCCA ATTGGCTAGC TTCTGTCCCC
GGTGCGAACA TTAACAGTAA TGGCCCAATT ACAGGCATAG CTCAGTACCG TGGTTTATTC
GGCGACAGAG TTGCTACTTC ACTTGATGGC CATCCTATTA TTGGTGCTGG CCCTAATGCA
ATGGACACAC CTTTAAGTTA CTCAACGCCA CTTATTGTTG ATTCAATGAC GGTATACCGT
GGTATTGCGC CAGTTTCTGC TGGCATGAGT ACAATCGGTG GTGCTATCGA TATTTCAATG
CGTAAAGCAG AAGTAATGAA TTCGGAGAAT GTGCAAGTAT CAGGTGATTT GCAAGCAGGC
TACCGAAGTA ATAATAGCGC GAGTACACTT TCAGGTGTGA CCAATATTGC TACAGGTGAT
GTTGCGGTAT TACTGTATGG CAATACTCAG GCCGGCGATA GTATGGAAAG TGGTGACGGA
ACGGTTATTG AGCCGACTGA TTTTGATAAA ACTCAAGCAG GTTTTGATGT AAGACATGCG
ACTGAAAATA ATACTGTGGG TTTGAGTTAT CACTATACAA AAACGACTGA CTCAGGCACG
CCAGCACTGC CAATGGATAT AGAATATATA GAAAGTCGCC GATTTAATGT AGATGGTGAT
TTTCAATTAG GACAATGGCA AGGTGAATGG TCAGTAGGCT ATTTAGATGC TGATCATGGT
ATGACTAACT TTTTAATGCG TGCCCATGAT CCAATGAAAA AACGTCGTAA CACCGCTCTT
GCAGACACGA CAGATTTTAA GTTTGTACTA AATCGTGAGT TCAGCTTTGG TGAATTGAGT
TTTGGTGTTG ATGGCTATCT TGCAACGCAT GACTCAGTTA TTACCAATCC AACGAATGCT
ATGTTCGAAG TAGTCAACTT TAATAATGTG CAAGATGACC GTTTTGGCTT TTTTACTGAA
TGGCAGAATC AATATGGACA AACTACTGTT CAGTTAGGCG TTAGAGTAAA ACATGCTATA
TCAAATGCTG ATGAAGTAAG CGGTAATATG GCAATGAATA TGGCTGACAT GAACATGGAC
TCAGGAATGG GTGGCATGGA TTCAGGTATG GGCGATATGG ACTCAGGCAT GGGTGATATG
AATTCAGGTA TGGACGACAT GAACTCAGCT ATGATGCCAA GCATGGGAAG TTTGTTAAGT
GATCTTGAAG GTGACTTTAA TAATGCAGAC CGCAAAGTTT CAGACACTAA TGTAGATGTT
GCCTTAAGTA CTCAAACACA ACTAAGTGAA ACTCTATCAC TTTATGTTGG TGTGGGTATG
AAAAGCCGTG CACCATCATA CCAAGAGCGT TACTTATGGA CACCAATGGA ATCTACCGGT
GGTTTAGCAG ATGGTCATAC TTATATTGGT GATATCGACC TTGAATCAGA AACAGCGTAT
CAAGCTGACC TTGGTTTAAC CTGGCAATCA AGTGACTTCA TGATTGCGCC ACATGTATTT
TATCAAAACA TTGATAACTA CATTCAAGGC ACGCAACTGG ATATGGACGA TGCATCAGCT
AAAATGATGG CGTCGATGAT GGCTCAAGAT GATAACCCAC TTAAATTTAG TAATGTTGAT
GCTAAATTAT ATGGCGCGGA TGTTAATTGG TATTACAATC TCACAGACAA CTTCCAGTTA
TCGGGAATCG CCAGTTATGT TAGAGGTGAA CGTCGTGATA TTGATGATAA CTTATACCGC
ATTGCACCAC TTAATGGTCA AGTAAGCGTT AGTTACCATA ATGAAAATGT CATCACCAAC
TTAACGTTAG TTGCTGTTTC GGCACAAGAT GATGTTTCTG CAACGAATAC CGAGCAGGCA
ACCTCTGGTT ATGGTTTAGT TAATATTGAT ATTGAGTATT TTGTAACAGC TGATTTTACC
CTACGTGGGG GGGTTGATAA CCTACTTGAT AGAGAATATC AAAATCATTT AGGCGGCTAT
AATCGTGTTA AAGAAGTTGG TACGCCAGTA ATGGATAGAT TGCCCAGTGA AGGTTTGAGC
GCGTGGGTAG AAGCGACATA CTCTTTTTAA
 
Protein sequence
MNFTLKPIAL AVNLTILGSS AMALPALALP FVANTAQGTI KDIEVITISN QRHNSLVDNQ 
SYAQGKTTEA DLANWLASVP GANINSNGPI TGIAQYRGLF GDRVATSLDG HPIIGAGPNA
MDTPLSYSTP LIVDSMTVYR GIAPVSAGMS TIGGAIDISM RKAEVMNSEN VQVSGDLQAG
YRSNNSASTL SGVTNIATGD VAVLLYGNTQ AGDSMESGDG TVIEPTDFDK TQAGFDVRHA
TENNTVGLSY HYTKTTDSGT PALPMDIEYI ESRRFNVDGD FQLGQWQGEW SVGYLDADHG
MTNFLMRAHD PMKKRRNTAL ADTTDFKFVL NREFSFGELS FGVDGYLATH DSVITNPTNA
MFEVVNFNNV QDDRFGFFTE WQNQYGQTTV QLGVRVKHAI SNADEVSGNM AMNMADMNMD
SGMGGMDSGM GDMDSGMGDM NSGMDDMNSA MMPSMGSLLS DLEGDFNNAD RKVSDTNVDV
ALSTQTQLSE TLSLYVGVGM KSRAPSYQER YLWTPMESTG GLADGHTYIG DIDLESETAY
QADLGLTWQS SDFMIAPHVF YQNIDNYIQG TQLDMDDASA KMMASMMAQD DNPLKFSNVD
AKLYGADVNW YYNLTDNFQL SGIASYVRGE RRDIDDNLYR IAPLNGQVSV SYHNENVITN
LTLVAVSAQD DVSATNTEQA TSGYGLVNID IEYFVTADFT LRGGVDNLLD REYQNHLGGY
NRVKEVGTPV MDRLPSEGLS AWVEATYSF