| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0466 |
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| Symbol | |
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| ID | 3521421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 467115 |
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| End bp | 469706 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282931 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_267224 |
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| Protein GI | 71280952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.539362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGTCAA TCAAAAATTT ATTAAAAGTC AGCTTGATAC TGTTAATTTT AGTCTCAATT
GCTGTTTATA GTTTATACCT TTCGATGCGT TCAGATTTAC CTAGTGTTGA GTTATTAAAA
GACTTGCATT GGCAGACACC ATTACAAGTT TATAGTCAAG ATGGTTTGTT AATTTCACAG
TTTGGTGAAA AGAAACGTAC ACCATTAACA CTAGAGGAAG TTCCTCAACA ACTTATTGAT
GCTTTATTAG CTACCGAAGA TGACCGATTT TATTTACATT TTGGTGTTGA TCCAATAGGC
ATGGGTCGTG CCGTGCTTGG TAAACTAATG GGTCAAGATA AAGGCGGCGC TAGTACCATC
ACTATGCAAG TAGCACGTAA TTTTTTCTTA ACTCGTGAGG TAACTTACAC ACGTAAAATT
CGTGAAATAT TCTTATCATT TCACATTGAA AATTTACTGA GTAAAGATGA AATATTAATG
CTATACATTA ATAAAATTGA ATTGGGCCAT AGAGCATTTG GTTTTGGTGC TGCAGCTCAA
GTTTATTATG GTAAAGAGAT TCATGAGCTT AATCTTGCTC AAATTGCGGT ACTCGCCGGG
CTACCTAAGG CTCCTTCAAC ATTAAATCCT ATTCGTTCAC CAAAACGAGC TCAAGCTCGA
CGGTCTGTCG TTCTTCAACG TATGCTAGTG AGCGGCTACA TTTCTGACCT ACAATATCAA
ACAGCTAAGA ATGCACCTAT CACAGGAAAA AGACATGGTG CTGAAATTGA ATTAAATGCT
CCTTACATTG CTGAAATGGC TCATAATGAA GTGCTTAAGC GTTACGGAAA AGATAAAGCT
TATACAGAAG GCTACAAAGT ATTTACTACT GTAACGGCAA AACTACAAAC CGCTGCAGAA
CAAGCCCTGG TAAATAATTT ATTGAATTAT GACCAACGTC ATGGATATCG TGGACCTCTC
TCTTCACTTA GACCTCAAGT AAGATCTACC GACGACACTT CTGAAATACA GATAGTTCCG
TTGTTACAAA AAGAGCTATC CAAGGCGTTA TCAGATGCGA CTTATTATCA AATGCTTGAA
CCGGCGATAG TGCTTGCCGT TGAAGAGAAG TCGGTCAGTA TTCAATTACG CAACAAAGTG
ACTGCAACAA TTAAGTGGCA AGGATTAGCT TGGGCACGTC CTTATATTAA TGACCAAAAG
CAAGGTAGAC CACCCAAAAC TGCAAAAGAT ATCCTGACGT ATGGTGATGT CATTTTAGTT
AGTAAGATGA CTGATAATAA TTATCGTCTA GGACAACTTC CAACCGCTAG TGCCGCCATT
GTGTCTTTAT CTCCAAATGA TGGTGCAATT AAAGCAGCCG TTGGCGGCTT TAGTTTCAAA
CAAAGTCAAT TTAATCGTGT TACTCAAGCT AAGCGTCAAG TGGGGTCAAA TATCAAGCCC
TTTATTTATT CTGCAGCTCT CGAGCATGGA TTCACTCTAG CTTCATTAGT GAATGATGCT
CCGATAAATC AGTGGGATAA AAGTTCAGGG GTTGTATGGC GTCCTAGAAA CTCGCCTGAA
AAATATGTGG GTCTATTGAG AGTTAGATTA GCACTAGCAC AATCAAAAAA TGTGATCGCA
GTTCGATTAT TAAAAAGTAT TGGCGTTACC AATACCATAA AGCACTTAAC CACCTTTGGA
TTCAATGCTA ACGATTTACC GCGCAATGAA ACGTTAGCAC TTGGCTCTGC CTCCTTAACA
CCGTTAGAAG TCGCCACAGG CTTTGCTGCG TTTGCTAATG GCGGATTTTT AGTAGAGCCC
TATCTAATTC AGCGTATTGA AAATAGCGAT GGTGAAATTA TTTATCAAGC TGATCCGGCC
ATAGCTTGTG ATCCATGCAT TCAAACTGAT TTATCAGATG ACACTGACCA AGAACTGGAT
GTATTAAGTA ATAATATTCC AGATCACAAT ATAACAATTG AAGATGAACA ACTATCTAAG
CAATCTGAGG ACGATCAAAC TGTTGAGATC AAGCAAGCAA GTCGCATTAT CAGTCCACAA
AATGCTTTTT TAATCACTCA AGCGCTTAAT AGTGCAATTT GGGGCGCCGA TTGGAATACT
AAACATGTCT GGCAAGGTAC AGGATTTCGA GCGAGAACAT TAAAGCGACG TGATATTGCA
GGTAAGACGG GAACAACCAA TGAAGCAAAA GATGCTTGGT TTTCCGGGTT TAGTCGAAAT
ATTGTTACCA CCTCATGGAT AGGCTTTGAT GATCCTCGCC ATATTCTGGG GCAATCCGTT
TATAATAATA ACTTAGGGAA AAATCAAACA ACGGGTAAAG AATTTGGTGC GAAATCAGCG
CAGCCGGCAT GGATTGACTT TATGCGTATT GCTCTGGCTG ACGCTGAGCC AGAAGCTTTT
CAACCTCCCG TGGATATTGT TTCGGTCCGT ATTGATAAAA CAACAGGAAA GTTAACCACC
AAGACCGATA AAACCAGTCA ATTTGAATAC TTCCGTCTAG GAAAAGTACC AACAGAATAT
GTTACTGAAG ACAGTAGCAG TGAAATATTA TCTGGCGGTC AGCAAAAAGA AGAAGAGGAA
GAGCTGTTTT AA
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| Protein sequence | MLSIKNLLKV SLILLILVSI AVYSLYLSMR SDLPSVELLK DLHWQTPLQV YSQDGLLISQ
FGEKKRTPLT LEEVPQQLID ALLATEDDRF YLHFGVDPIG MGRAVLGKLM GQDKGGASTI
TMQVARNFFL TREVTYTRKI REIFLSFHIE NLLSKDEILM LYINKIELGH RAFGFGAAAQ
VYYGKEIHEL NLAQIAVLAG LPKAPSTLNP IRSPKRAQAR RSVVLQRMLV SGYISDLQYQ
TAKNAPITGK RHGAEIELNA PYIAEMAHNE VLKRYGKDKA YTEGYKVFTT VTAKLQTAAE
QALVNNLLNY DQRHGYRGPL SSLRPQVRST DDTSEIQIVP LLQKELSKAL SDATYYQMLE
PAIVLAVEEK SVSIQLRNKV TATIKWQGLA WARPYINDQK QGRPPKTAKD ILTYGDVILV
SKMTDNNYRL GQLPTASAAI VSLSPNDGAI KAAVGGFSFK QSQFNRVTQA KRQVGSNIKP
FIYSAALEHG FTLASLVNDA PINQWDKSSG VVWRPRNSPE KYVGLLRVRL ALAQSKNVIA
VRLLKSIGVT NTIKHLTTFG FNANDLPRNE TLALGSASLT PLEVATGFAA FANGGFLVEP
YLIQRIENSD GEIIYQADPA IACDPCIQTD LSDDTDQELD VLSNNIPDHN ITIEDEQLSK
QSEDDQTVEI KQASRIISPQ NAFLITQALN SAIWGADWNT KHVWQGTGFR ARTLKRRDIA
GKTGTTNEAK DAWFSGFSRN IVTTSWIGFD DPRHILGQSV YNNNLGKNQT TGKEFGAKSA
QPAWIDFMRI ALADAEPEAF QPPVDIVSVR IDKTTGKLTT KTDKTSQFEY FRLGKVPTEY
VTEDSSSEIL SGGQQKEEEE ELF
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