Gene CPS_0424 details

Gene Information

• Locus tag: CPS_0424
• Symbol: nudE
• ID: 3520533
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 429169
• End bp: 429720
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637282889
• Product: ADP-ribose diphosphatase NudE
• Protein accession: YP_267182
• Protein GI: 71280070
• COG category: [L] Replication, recombination and repair; [R] General function prediction only
• COG ID: [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATG AAAACCAGTT ACCTATCATT ACTCATCGCC AACAAGTGGC TAAAAGTGCA 
CTATTTGGCA TTGAACAAAT CGACCTTACT TTTAGTAATG GCGAACAAAG GCAATATGAG 
CGCATGATGG GCTCTGGGCG TGGTGCTGTG ATGATAGTGC CAATGATTGA TGATGAAACA 
CTATTATTGG TCCGTGAATA TTGTGCAGGT ACGCACAGTT ATTTGTTAGG TTTCCCCAAA 
GGGCTGATTG ACGAAGGTGA GCTTGCAGAA CAGGCTGCCA ACCGAGAACT CCAAGAAGAA 
ATTGGTTATG GTAGCGAGCA AATGCATCAG ATATCAGAAA TGATGATGGC TCCTGCTTTT 
TTTAATGCCA AAATGACCAT CTTTTTAGCT AAAAACCTAT ACAGTTCTGA ACTTGAAGGG 
GATGAACCCG AGCCATTAGA AGTGGTGTCT TGGCCCATTA AAGACTATAA AGAACTATTA 
CAACAAACAG ATTTTACTGA AGCACGCAGT ATTGCAGCAT TAATGTTGGT ACGTGACCTG 
CTTGCAGTTT AA 

 

Protein sequence

MADENQLPII THRQQVAKSA LFGIEQIDLT FSNGEQRQYE RMMGSGRGAV MIVPMIDDET 
LLLVREYCAG THSYLLGFPK GLIDEGELAE QAANRELQEE IGYGSEQMHQ ISEMMMAPAF 
FNAKMTIFLA KNLYSSELEG DEPEPLEVVS WPIKDYKELL QQTDFTEARS IAALMLVRDL 
LAV