Gene CPS_0408 details

Gene Information

• Locus tag: CPS_0408
• Symbol: ubiX
• ID: 3523316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 414724
• End bp: 415344
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637282873
• Product: aromatic acid decarboxylase
• Protein accession: YP_267166
• Protein GI: 71278958
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAATG ATTTTAATGG TAAAATAACC CTTGCCATCA CCGGTGCCTC GGGTGCTTCT 
TATGCTATGC GGCTAATAGA GTGTTTAATC GCAGCAAACT ATCAGCTCTA TATTTTGTGC 
TCAAGTGCCG GTCGTATTGT TTTAGATACT GAAGTGGGCG TTAAAATACC CAGTTCTCCT 
GATGCTGCCA GTAAATTTCT CACCGAAAAA TATCAGGCCA AAGATCAACA AATAACGGTT 
TTTGGTAAAG AACAGTGGTT TTCTCCTGTT GCTTCGGGCT CTTCAGCACC GAAACAAATG 
GTTGTTTGTC CCTGTTCTAC TGGAACAATG GCCGCTATTT GTCATGGTAT GAGTGACAAC 
TTAATTGAAC GTGCCGCGGA TGTGGTGATA AAAGAACGTG GTCAATTGAT TTTAATGGTA 
AGAGAAACAC CCTTTTCAAC GTTACACTTG CAAAATATGC TCAGCTTATC TCAGCAAGGA 
GTCACTATTA TGCCTGCGTC CCCTGGATTT TATCATAAGG TTGAAACCAT TGAAGATCTC 
ATCGATTTTA TGGTGGGTAG AGTATTAGAT CACCTTGGTA TTGAACAAGA TATTATGCCG 
CGTTGGGGTT ATAACATTTA A 

 

Protein sequence

MNNDFNGKIT LAITGASGAS YAMRLIECLI AANYQLYILC SSAGRIVLDT EVGVKIPSSP 
DAASKFLTEK YQAKDQQITV FGKEQWFSPV ASGSSAPKQM VVCPCSTGTM AAICHGMSDN 
LIERAADVVI KERGQLILMV RETPFSTLHL QNMLSLSQQG VTIMPASPGF YHKVETIEDL 
IDFMVGRVLD HLGIEQDIMP RWGYNI