| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0405 |
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| Symbol | mpl |
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| ID | 3520268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 412394 |
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| End bp | 413833 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637282870 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
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| Protein accession | YP_267163 |
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| Protein GI | 71279807 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.152417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATA AAATTCAACA CCTTCATATC TTAGGTATTT GTGGCACTTT TATGGGAGGG
ATCGCTGCTA TAGCCAAGCA ACTTGGCTTT AAAGTTAGTG GTTCTGATGC CAATGTCTAT
CCGCCAATGA GCACTCAGTT AGAGCAGTTA GGCATTGAGT TAATGTCAGG TTATCAAGTC
GATAATTTCT CTGATGATAT CGATTTGGTT ATTGTTGGCA ATGCGATGTC TCGTGGAAAT
CCAATGGTGG AATATATGCT AGATCGCAAT ATTCCTTATA CATCAGGCCC ACAATGGTTG
CTTGAAAATG TATTAAAAGA TCGTTGGGTC CTTGCCGTTT CGGGTACGCA TGGTAAAACA
ACGACCAGTA GTATGCTGGC GTGGATTTTA GAGTATGCTC ATATGTCGCC AGGTTTTCTT
ATCGGTGGAG TACCACAAAA TTTCTCTAGT TCAGCTCGTT TAGGTGATAC ACCTTTCTTT
GTCATTGAAG CTGACGAGTA CGATAGCGCC TTTTTTGATA AACGATCTAA ATTTGTGCAT
TACCGTCCAC GAACTCTAGT GATTAATAAC TTAGAGTTTG ATCATGGTGA TATTTTTAAT
GATCTCAGTG ATATTCAAAA ACAATTTCAT CACCTCATCC GTATGGTGCC AAGTAATGGT
TTGATTTTAT CACCCGCTAA TGAAGAAGCT ATTACTGAAA CGTTAGCTAT GGGCTGTTGG
ACACCGACCG AATTCTCTAA TGGAGAGCTT CAACAAGATG AACCGTCCGA TGCAGGTTGG
CAAGTCGAAA AATTAAATGC TCAGGGCAGT GAGTTTATCG TTAAGTTTAA CGGTAAAGAG
CAAGGTGTGG TCAAGTGGGA TCTTATCGGT GATTTTAATA TCGATAACGC AGTGATGGCA
ATAGCGGCAG CACGCCATGC GGGTGTGCCA AGCGCAGTCT CTATTGAAGC GTTAGCCGAG
TTTATTAATA CTAAGCGTCG TTTTGAGCTT CGAGGTATAG TTAATAATAT TAGTGTGTAT
GATGATTTTG CTCATCACCC AACGGCCATA GCAAAAACAT TAGCTGGTGT ACGTGCTAAA
CTTTCACAAC AAGAAAGTGA GCAAGAACAA GTTGGGCGCA TTTTCGCAGT ATTAGAGCCA
AGATCGAATA CCATGAGATC AGGAGTTCAT AAAGAATCAT TACCTAAGTC ATTGATTGAT
GCGGATCAGG TTTTTATCTA TCAAGGTGAA CAGGTGACTT GGTCAGTGAG TGATTTAATC
AAACAATGCA AGCCAGCGTG TCAAGTTGAA GACAATGTTG AACGCTTAGT GGAATCTATT
GCCCAACAAG CGCAAGCTGG CGACATAATT GTTGTTATGA GCAACGGTGG TTTTGCCGAC
ATTCATAATA AATTATTGAA CCGTTTAGCG AATATACCCG TACCACTTGA AGATGCATGA
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| Protein sequence | MTNKIQHLHI LGICGTFMGG IAAIAKQLGF KVSGSDANVY PPMSTQLEQL GIELMSGYQV
DNFSDDIDLV IVGNAMSRGN PMVEYMLDRN IPYTSGPQWL LENVLKDRWV LAVSGTHGKT
TTSSMLAWIL EYAHMSPGFL IGGVPQNFSS SARLGDTPFF VIEADEYDSA FFDKRSKFVH
YRPRTLVINN LEFDHGDIFN DLSDIQKQFH HLIRMVPSNG LILSPANEEA ITETLAMGCW
TPTEFSNGEL QQDEPSDAGW QVEKLNAQGS EFIVKFNGKE QGVVKWDLIG DFNIDNAVMA
IAAARHAGVP SAVSIEALAE FINTKRRFEL RGIVNNISVY DDFAHHPTAI AKTLAGVRAK
LSQQESEQEQ VGRIFAVLEP RSNTMRSGVH KESLPKSLID ADQVFIYQGE QVTWSVSDLI
KQCKPACQVE DNVERLVESI AQQAQAGDII VVMSNGGFAD IHNKLLNRLA NIPVPLEDA
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