| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0398 |
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| Symbol | ntrB |
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| ID | 3520812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 404960 |
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| End bp | 406075 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637282863 |
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| Product | nitrogen regulation protein NR(II) |
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| Protein accession | YP_267156 |
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| Protein GI | 71280346 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.737334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCC GTAGTTATAT ACAAGATCAC AAGTTGTCTT ACCAGCAATC ACTTGCCAAT
CAGTTGGTGA CTGCTGTAAT TATTCTCAAT GAAAAACTCT CCATCGTTTA TGTGAACCCA
GCCGCTGAAG CACTATTAAA TAAAAGCTTG TATCGTTTAT TCAATACTGA ATCTGAAATG
ATTTTTGCTA ATACCAGTAT CAATCGCTCA CGTTTAATAC AACTGCTTGC CACCGGTCAA
GAATTTACAG ATTGCGACAT TGTTGTAGAG TTAAATGAAA GCCACCGATT TACGGCAGAA
GTAACCGCGT CTTCAGTCGA GTTTGAAAGA ACTCCCCATG TATTGCTCGA ATTCAAACAA
ATAGATCAAC AAAAGCAAAT TAGCTTAGAA GTTTTTCAAC ATCAGCAATG GCTTGCTGCA
CGTGATCTTA TTAAAGGTCT GGCTCACGAA ATTAAAAATC CGCTTGGGGG GTTAAGAGGC
GCAGCACAGT TACTTAGTAA AGAAGTGACT AGTGAGCAAC AAGAATATAC CAGCATGATC
ATTGAGCAAG CTGACAGATT AACTAACTTG GTTGATCGTC TATTAGGTCC AAACCAACTG
CCCCAAATGC AGGCACAAAA TGTCCATGGC ATACTTGAGA AGGTATGCCA GTTGGTCGGC
TATTCAAATG GACAAAAAAT TCATTTGTTA CGCGATTATG ATCCCTCACT TCCTGCGGTT
GAATGTGATC AAGAAAAACT GCAACAAGCA GTGCTTAATA TTGTTAACAA TGCTATTCAA
GCCATTGATG AAAAACACAA TATAACCCTA CGTACTCGAA TTGCTAGTAA TAGAACCATT
CATGGCAAAC GAATCAAGTT AGCCATTGAA ATTAGCATAA TTGATAATGG ACCTGGTATC
CCCACTAAAA TTCAAGACAC ACTTTTTTAT CCTATGGTCT CTGGTCGTTC TAATGGTACA
GGGTTAGGTT TATCTATTTC ACAAACACTA ATAAATCAAC ACCAAGGTAA GCTATCGTGT
CATAGCCGCC CTGGTCATAC TGAATTTACA ATCCTACTAC CATTAAAACA GCAACCTTTA
AATCGAGCAC CTTTATCACA AGAGAGTACA TTATGA
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| Protein sequence | MHSRSYIQDH KLSYQQSLAN QLVTAVIILN EKLSIVYVNP AAEALLNKSL YRLFNTESEM
IFANTSINRS RLIQLLATGQ EFTDCDIVVE LNESHRFTAE VTASSVEFER TPHVLLEFKQ
IDQQKQISLE VFQHQQWLAA RDLIKGLAHE IKNPLGGLRG AAQLLSKEVT SEQQEYTSMI
IEQADRLTNL VDRLLGPNQL PQMQAQNVHG ILEKVCQLVG YSNGQKIHLL RDYDPSLPAV
ECDQEKLQQA VLNIVNNAIQ AIDEKHNITL RTRIASNRTI HGKRIKLAIE ISIIDNGPGI
PTKIQDTLFY PMVSGRSNGT GLGLSISQTL INQHQGKLSC HSRPGHTEFT ILLPLKQQPL
NRAPLSQEST L
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