| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0397 |
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| Symbol | ntrC |
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| ID | 3520592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 403563 |
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| End bp | 404963 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637282862 |
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| Product | nitrogen regulation protein NR(I) |
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| Protein accession | YP_267155 |
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| Protein GI | 71280128 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.482559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCG AACAAGTTTG GATAGTTGAT GACGATAGCT CAATTAGATG GGTTCTTGAG
AAAGCTTTTG CTAATGCAAA TATAAGTTGT GCTGCTTTTG AAAGTGCTGA AAATTTATTG
ATTGCATTAG AACATGGTCA ACCAGAAATC ATTATTTCTG ATATTCGTAT GCCAAATATC
GATGGAATGG AGTTATTAAA AAGGTTAAAT AAGCAACATT CTCATATTCC TGTGATTATT
ATGACAGCTC ACTCTGACTT AGACAGCGCT GTTAATGCCT ATCAAGGTGG CGCATTTGAA
TACTTGCCTA AACCATTTGA TATTGACGAA GCCATCAACT TAAGTAAACG TGCCCTCACT
CATGCAAGAG AGCAAAATGA GAAAAATAAA AATCAAAAAG ATATACCTTT AGCCGTCGGC
CTAATTGGTG AAGCCCCCGC CATGCAAGAA GTATTTCGTG CTATTGGTCG CTTATCCCGC
TCAAGTATTA GTGTGCTAAT TAATGGTGAA TCAGGAACAG GTAAAGAATT AGTTGCTCAA
GCGCTTCATT CTCATAGCCC TCGCGTAAAT GAACCCTTTA TTCCGTTAAA TATGGCCGCC
ATCCCAAAAG ATTTAATTGA ATCTGAATTA TTTGGTCATG AAAAAGGAGC CTTTACCGGA
GCTAATGCTA TTCGACAAGG ACGGTTTGAA CAAGCACATG GAGGGACTTT ATTTTTAGAT
GAAATTGGCG ATATGCCATT AGACATTCAA ACTCGTCTGT TACGTGTACT GTCTGATGGT
CAGGTTTATC GTGTTGGCGG GCATCTACCC GTTCAAGTCG ATGTACGGAT TATTGCCGCT
ACTCATCAAC ATCTTGAGGA ACGTGTGAAG AAAGGTGAAT TTAGAGAAGA TTTATTTCAC
CGGCTCAATG TTATTCGCAT TCATTTACCT AGCCTTAGAG AACGAAAAGA AGATATTCCA
CAGCTGAGCC AGCACTTTTT AACGCAAGCA GCCAATGAAC TAAGTGTTGA GGTCAAAACA
TTAAGTAAAA AAGCCAGTAA CTTCCTCAAT AACTGCCATT GGCCTGGGAA CGTTAGACAA
TTAGAGAATA TTTGTCGTTT TTTAACGGTT ATGGCAAGTG GTCAGGAAAT TCTTATTGAA
GATTTACCTA ATGAATTAGT CGAGAAATCA ACATCGTTGA AGAATGATTC AAATGCATGG
CAAGACGTAC TGAGTACTTG GATGGACCAA GAACTAGCAC AGGGGAAAGA TGCCATTTTA
GATTATGCTC AGATTGAATT TGAAAAGATA ATGCTTGAAC GAGCGTTAAT ATTTACTCAG
GGTCATAAAC AAGATGCGGC CAAAAAATTA GGCTGGGGTA GAAATACCTT AACGAGAAAA
TTGAAAGAAT TTGATAAGTA A
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| Protein sequence | MITEQVWIVD DDSSIRWVLE KAFANANISC AAFESAENLL IALEHGQPEI IISDIRMPNI
DGMELLKRLN KQHSHIPVII MTAHSDLDSA VNAYQGGAFE YLPKPFDIDE AINLSKRALT
HAREQNEKNK NQKDIPLAVG LIGEAPAMQE VFRAIGRLSR SSISVLINGE SGTGKELVAQ
ALHSHSPRVN EPFIPLNMAA IPKDLIESEL FGHEKGAFTG ANAIRQGRFE QAHGGTLFLD
EIGDMPLDIQ TRLLRVLSDG QVYRVGGHLP VQVDVRIIAA THQHLEERVK KGEFREDLFH
RLNVIRIHLP SLRERKEDIP QLSQHFLTQA ANELSVEVKT LSKKASNFLN NCHWPGNVRQ
LENICRFLTV MASGQEILIE DLPNELVEKS TSLKNDSNAW QDVLSTWMDQ ELAQGKDAIL
DYAQIEFEKI MLERALIFTQ GHKQDAAKKL GWGRNTLTRK LKEFDK
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