Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0391 |
Symbol | ppaC |
ID | 3519677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 394363 |
End bp | 395286 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282856 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | YP_267149 |
Protein GI | 71278115 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAATT ACGTTGTAGG ACACAAAATA CCTGATTCAG ATTCTATCTG TTCAGCTATC GCATTATCAT ATTTGAAAAC CACTTTAGGC GAGGAAACTG TTCCTGCTCG TCTAGGTGAA CTTACCCCTG AAACACTGTT TATCTTAGAC AAGTTTGGCT TTGAACAGCC AGAGCTAAAA ACTAGCTATG CTGGCGAAGG TGTTTATATT GTTGATCACA GTGATATTGA ACTTGCTCCT GATGATATTG ATCAAGCGAC TATCTTAGGT ATTATTGATC ACCACAAACT TGGTGATTTA ACGACGTCTA CACCGCTTGA AATATGGGTC CGCCCGGTAG GCTGTACTAA TACAATCATC AAGATGATGT ATGATTTTAA TAATGTTGAG ATCCCGAAAA ATATTGCGGG TGCAATGTTA TGTGCCATTT TAAGTGATAC CGTTATTTTT AAATCACCAA CCTGTACAAC TGCAGATATT AAATGTGTAG AAGCATTAGC TGAGATTGCC GGTATTGAAG ATTTTAAAGA GCTTGGCATG GACATGTTTA GAGTAAAATC TGCAGTTGAA GGTACTCCAA TTCGAGATCT AGTAAAACGA GATTTTAAAG ATTTCAATAT GAACGGTCAG AAAGTGGGTA TTGGTCAACT TGAAGTCATT GATTTAGCCG TTTTTGATGA CATTAAAGAT GCGTTGTATG CTGATATTGC TGAACTTAAA GCTGAGGGTG ACCGTCACAG TGTTTTCCTA CTATTAACTG ATATCATGAA AGAAGGTTCA GAGTTATTGA TAGCGAGCGA TAGTGATACG TTAGCTGAGC AAGCATTTGG TGTTACACCA AAAGATGGTA AAGCTTGGTT AGAAGGTGTG TTAAGCCGTA AAAAGCAAGT AGTACCGCCA CTACAAGAAA TTCTTCTTAA ATAG
|
Protein sequence | MPNYVVGHKI PDSDSICSAI ALSYLKTTLG EETVPARLGE LTPETLFILD KFGFEQPELK TSYAGEGVYI VDHSDIELAP DDIDQATILG IIDHHKLGDL TTSTPLEIWV RPVGCTNTII KMMYDFNNVE IPKNIAGAML CAILSDTVIF KSPTCTTADI KCVEALAEIA GIEDFKELGM DMFRVKSAVE GTPIRDLVKR DFKDFNMNGQ KVGIGQLEVI DLAVFDDIKD ALYADIAELK AEGDRHSVFL LLTDIMKEGS ELLIASDSDT LAEQAFGVTP KDGKAWLEGV LSRKKQVVPP LQEILLK
|
| |