| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0353 |
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| Symbol | |
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| ID | 3519427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 363280 |
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| End bp | 364287 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282818 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_267111 |
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| Protein GI | 71279069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATAA TTACCGACTC AAAGCCTTAT ATAGCAAGGG CTACAATCAA TCACAAGCTC
TCAGTTGCGC CGATGCTCGA TTGGACAGAT AAACATTCTC GTTATTTCTA TCGTCTAATG
ACTCAACACA CTGTGCTTTA CACAGAAATG GTCACTACCG GTGCAATTTT ACGTGGCAAG
GGGGATTACT TATCCTATAA CGATGCAGAG CACCCATTAG TATTACAGCT AGGGGGTAGT
GATGTTAAAG CAATGACGGA ATGTGCCAAA ATTGCTGAAC AATACGGTTA TGATGAAGTA
AATATTAATG TTGGCTGTCC GTCTGATAGA GTTCAGAACG GTCGATTTGG TGCATGTTTG
ATGGCCGAGC CTGCTTTGGT TGCTCAATGC GTTAACCAAA TGCAATCAGC GACGAATATT
CCAGTCACCG TGAAATCACG GATCGGTATT GATGATTTAG ATTCTTACGA ATTTTTGCAT
ACTTTTATTG AAGAAGTATC AAAAGCTGAT TGTCGCCATT TCATTATTCA TGCGAGAAAA
GCCTGGTTGA CTGGATTAAG TCCTAAACAG AATCGTGATG TTCCCCCTTT AGACTACGAT
CGTGTTTATC AAATAAAAAA TGATTTTAAG GATTTAGAAG TATCCATTAA TGGTGGTATT
AAAACGTTCT CTGAAGCTAA TGAACATCTT CAGCATATTG ATGGCGTAAT GATTGGACGA
GAAATATATA ACAGCCCATA TATGCTCGCA GATGCAGATA ATGAAATATA CCAATCAGAC
ACTATAAAAT TATCAAGATC TGAAGTGATT GATTTAATGG TTCCCTATAT CGACGAAACA
ATAGCGAATG GCGGGCGAGC GTGGCATGTA CTGCGTCATA TGTTAGGGCT TTGTAATGGT
TTATCAGGAG CGCGTAAGTT CAGACAACAC TTGAGTGAGT GTGCAGGTAA AGATGGTGCT
GGTGGACAAG TACTACTTGA TGCATTCAAT AAGGTTACTT TACCTTAA
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| Protein sequence | MTIITDSKPY IARATINHKL SVAPMLDWTD KHSRYFYRLM TQHTVLYTEM VTTGAILRGK
GDYLSYNDAE HPLVLQLGGS DVKAMTECAK IAEQYGYDEV NINVGCPSDR VQNGRFGACL
MAEPALVAQC VNQMQSATNI PVTVKSRIGI DDLDSYEFLH TFIEEVSKAD CRHFIIHARK
AWLTGLSPKQ NRDVPPLDYD RVYQIKNDFK DLEVSINGGI KTFSEANEHL QHIDGVMIGR
EIYNSPYMLA DADNEIYQSD TIKLSRSEVI DLMVPYIDET IANGGRAWHV LRHMLGLCNG
LSGARKFRQH LSECAGKDGA GGQVLLDAFN KVTLP
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