| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0322 |
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| Symbol | amiB |
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| ID | 3519800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 332045 |
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| End bp | 333376 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637282787 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_267088 |
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| Protein GI | 71279345 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCGGA GAATTCTCCT ATCAATAGCA AGGCTACGTG CGCTTAGTTT TCTATGTGTT
GCTGTATTAA GTTTACTTTC AGTGAATACC TATGCTGCAA ATAGCATTGA TGGCATTCGT
GTCTGGCCCG CGCCGGAAAA TACTCGTATT GTTTTTGATG TAAAGAAAAA ACCAGATTAT
AAATTTTTTA CTCTCAGTAA ACCAAATCGA TTGGTAATTG ATTTTACCAA TACAAAAAAC
ACCGTAGCTT TAAAAAATCT TGCCGTTAAC GACCCACGAG TAAAACTTTT TCGTTCAAGC
GTGAATAAAG GCAAAACTCG TTTGGTATTA GAATTAACTA AATCTTATCA GCTTACCGTT
TTCCCGCTAG CACCTGCGGG ACAATACGGA CATCGACTGG TGATTGATCT TTACGATAAA
AACCGTAGTA AAAAGAATGT TTCTAAACCA AAAAAGAGTG TTGGCGATAT CATTATTGGT
ATTGATGCTG GCCATGGTGG TGAAGATCCT GGTTCAATCG GTGGTAAAGG TACCTATGAA
AAAAGAGTTA CCTTAGCGAT AGCTAAAAAA TTACAAAAAG TAATCAACAA AGAAAAAGGC
ATGAAAGCGG TGATGATCCG CAGTGGCGAT TATTATGTTA ATTTGAATCG TCGCACTAGC
CTAGCTAGGG ATAAGCATGT CGATTTTTTA GTTTCAATAC ATGCGGATGC TTTTCATACT
CCAGGACCTA GTGGTGCCTC AGTTTGGGTA GTAACGAAAA GTCGTGCTGA GTCAGAGTTA
TCAAGGTGGT TGGTAAATAG AGAGAAAAAA TCAGAATTAC TTGGTGGTGG CGGTGGGGTA
ATCAAAAACA CTTCAGATAG CCACTTAGCA TTAGCTTTAG CAGATATGAG CAAAGAGCAT
TCTTTAGGGG TAAGTTTTGG TGTGGCTAAT AATGTTATAA AAGAGCTGAA AAAAATCACC
AAAATGCATA AGTCAACACC GCAAAATGGT AATTTTGCAG TGCTTAAATC GTCGGATATT
CCTTCAATAT TAGTTGAAAC AGGTTTTATC TCAAATCACA AAGAAGAGAA AAATTTAACT
TGGTCTAAAC ACCAGCAACG TTTAGCGAAT GCAATCCACG GTGGTATCAA AAAGCACTTT
TTAGCGCACC CATTGACCGG TTCTTATTTT GCATCGGTGG GGTATAAAAA GCACAAGGTA
CGCAGTGGAG AATCACTATC GGTACTAGCC AAACGTTATA ATATATCTAT GAGCAAACTT
AAATCTATCA ATAAATTAAA AACTAATTCA TTAAGAATTG GTCAAACGTT AAAAATTCCT
CGTACTGGAT AA
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| Protein sequence | MYRRILLSIA RLRALSFLCV AVLSLLSVNT YAANSIDGIR VWPAPENTRI VFDVKKKPDY
KFFTLSKPNR LVIDFTNTKN TVALKNLAVN DPRVKLFRSS VNKGKTRLVL ELTKSYQLTV
FPLAPAGQYG HRLVIDLYDK NRSKKNVSKP KKSVGDIIIG IDAGHGGEDP GSIGGKGTYE
KRVTLAIAKK LQKVINKEKG MKAVMIRSGD YYVNLNRRTS LARDKHVDFL VSIHADAFHT
PGPSGASVWV VTKSRAESEL SRWLVNREKK SELLGGGGGV IKNTSDSHLA LALADMSKEH
SLGVSFGVAN NVIKELKKIT KMHKSTPQNG NFAVLKSSDI PSILVETGFI SNHKEEKNLT
WSKHQQRLAN AIHGGIKKHF LAHPLTGSYF ASVGYKKHKV RSGESLSVLA KRYNISMSKL
KSINKLKTNS LRIGQTLKIP RTG
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