Gene CPS_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0300 
Symbolrep 
ID3518484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp308267 
End bp310300 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content41% 
IMG OID637282765 
ProductATP-dependent DNA helicase Rep 
Protein accessionYP_267066 
Protein GI71278734 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01074] ATP-dependent DNA helicase Rep 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA ATCCCGGACA AAATGAAGCA GTAAAATTTG TGAGTGGTCC ATGCCTTGTG 
TTGGCAGGCG CTGGCTCAGG TAAAACCGGG GTTATTTGTC AAAAAATCGC CTACCTCATT
CAAAAGTGTG ACTACAAAGC ACGTAATATT GCCGCGGTAA CCTTTACCAA TAAAGCGGCA
CGTGAAATGA AAGAGCGTAT TCAAAAAATG CTTGGTCGAG ACCTAACTCG CGGTTTAACG
GTTTCTACGT TTCACTCGTT AGGGCTTGAT ATTGTTCGTC GCGAAATAAA AATTCTGGGT
TACAAGCCTG GCTTTACCTT ATTTGATGAT CAAGACAGCC TAGCATTACT CAAGGAATTA
ACCATTGATG AACTTGATGG CGATAAAGAC TTGTTGAGCA AACTACAAAG CAAAATTTCA
AATTGGAAAA ATGACTTATT CTTACCTGAT GATGCTCTAA AATCTGCAAG TGATGCTGAC
AGCAGTGAAT ATGCTGAATT TTATCAGCGC TATCATAAAC ATATGAAAGC ATACAATGCA
TTGGATTTTG ATGATTTGAT TCTGATCCCG ACACTGTTAA TGAAAAACTA TCCTGAAGTG
CGTGAGCGTT GGCAGAACAA AATTCGTTAT TTATTGGTGG ATGAATATCA GGATACTAAC
GCTAGCCAAT ATGAATTAGT TAAGAATATT ACTGGTGAGC GTGGTCGTTT AACCGTAGTA
GGCGATGACG ATCAGTCTAT TTATTCATGG CGTGGTGCTA AACCAGAGAA TTTAATACTG
CTTGGTAAAG ACTTTCCCGC GTTAAAATTA ATTAAACTTG AGCAAAATTA CCGTTCGAGT
GGTCGTATCT TAAAATGCGC CAATGTTCTG ATTGCCAATA ACCCGCATGT GTATGACAAA
GCATTATTTA GTGAACTTGC CTACGGTGTA GAACTTAGAG TAATACAAGC GAAAAATGAA
GAAAATGAAA TTGAGCGTGT TATAGGCGAA CTCATTGGTC ATCGCTTTAT GAACCGCAGT
CAATATAAAG ATTACGCGGT ACTTTATCGT GGTAATCACC AATCACGTTT ACTTGAAAAA
GCACTGATGC AAAACCGTAT CCCTTATAAA ATCAGTGGTG GTACTTCGTT TTTTTCCCGT
CCAGAAATAA AAGATGTCAT GGCCTATTTG CGGGTACTGG TTAACCCTGA CGATGACAAT
GCTTTCTTAC GTATTGTGAA TGTGCCTAAA CGTGAATTAG GCCCAGCGAC GTTAGAGAAA
TTAGGCACCT ACGCCAACAT GCGCCAAATT AGTATGTTTG CTGCCAGTTT TGAACTTGGT
TTAGAACAAA CCTTAACCGG TCGCAGCTTA ATGAAAATGC AAGCATTTAC ACAATGGGTT
GTTGATATTG CTGATCAGGC CGAACGAGGT GATACTGCCG CAGTATTACG CTCCATGATC
CGTCAAATTA ATTACGAAGA CTTCCTATAC GATACCTCGA TGAGTGCTAA AGCAGCCGAG
ATGCGTATGA AAAATGTCAC CGAGCTCTTT AGCTGGGTTA CACAAATGCT TGAAGGTAGT
GATGACGAAG AGCCGATGAC CTTACCGCAA ATTGTTACTC GTTTAACCTT GCGCGATATG
ATGGAACGAA ATGAAGAAGA GGACAGTAAC GATCAAGTTC AATTGATGAC ACTGCATGCT
TCTAAAGGCC TCGAGTTTCC CTATGTATTC TTAATTGGTA TGGAAGAAGG TTTATTACCC
CATCAAACCA GTATTGATGA AGGCAGTGTT GAAGAAGAGC GTCGCCTTGC TTATGTTGGT
ATTACTCGCG CTCAGCGTGA ATTAATTTTT ACTTACGCTA GAGAGCGCAG GCAATTTGGT
GAATTGTCTC GTACTGAAGC TAGTAGATTT TTACATGAAT TACCCCAAGA TGACTTAAAT
TGGGAATTGG GCGCCGCAAA GAAGAAAACC GTTGAGCACG TTGAGAAATC AAATCAACAA
GGCATGGCAG GTTTACGTGC CCAACTCGCT AAAGCTAAAG AAGCGAAAAA ATAA
 
Protein sequence
MKLNPGQNEA VKFVSGPCLV LAGAGSGKTG VICQKIAYLI QKCDYKARNI AAVTFTNKAA 
REMKERIQKM LGRDLTRGLT VSTFHSLGLD IVRREIKILG YKPGFTLFDD QDSLALLKEL
TIDELDGDKD LLSKLQSKIS NWKNDLFLPD DALKSASDAD SSEYAEFYQR YHKHMKAYNA
LDFDDLILIP TLLMKNYPEV RERWQNKIRY LLVDEYQDTN ASQYELVKNI TGERGRLTVV
GDDDQSIYSW RGAKPENLIL LGKDFPALKL IKLEQNYRSS GRILKCANVL IANNPHVYDK
ALFSELAYGV ELRVIQAKNE ENEIERVIGE LIGHRFMNRS QYKDYAVLYR GNHQSRLLEK
ALMQNRIPYK ISGGTSFFSR PEIKDVMAYL RVLVNPDDDN AFLRIVNVPK RELGPATLEK
LGTYANMRQI SMFAASFELG LEQTLTGRSL MKMQAFTQWV VDIADQAERG DTAAVLRSMI
RQINYEDFLY DTSMSAKAAE MRMKNVTELF SWVTQMLEGS DDEEPMTLPQ IVTRLTLRDM
MERNEEEDSN DQVQLMTLHA SKGLEFPYVF LIGMEEGLLP HQTSIDEGSV EEERRLAYVG
ITRAQRELIF TYARERRQFG ELSRTEASRF LHELPQDDLN WELGAAKKKT VEHVEKSNQQ
GMAGLRAQLA KAKEAKK