Gene CPS_0300 details

Gene Information

• Locus tag: CPS_0300
• Symbol: rep
• ID: 3518484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 308267
• End bp: 310300
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637282765
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_267066
• Protein GI: 71278734
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGA ATCCCGGACA AAATGAAGCA GTAAAATTTG TGAGTGGTCC ATGCCTTGTG 
TTGGCAGGCG CTGGCTCAGG TAAAACCGGG GTTATTTGTC AAAAAATCGC CTACCTCATT 
CAAAAGTGTG ACTACAAAGC ACGTAATATT GCCGCGGTAA CCTTTACCAA TAAAGCGGCA 
CGTGAAATGA AAGAGCGTAT TCAAAAAATG CTTGGTCGAG ACCTAACTCG CGGTTTAACG 
GTTTCTACGT TTCACTCGTT AGGGCTTGAT ATTGTTCGTC GCGAAATAAA AATTCTGGGT 
TACAAGCCTG GCTTTACCTT ATTTGATGAT CAAGACAGCC TAGCATTACT CAAGGAATTA 
ACCATTGATG AACTTGATGG CGATAAAGAC TTGTTGAGCA AACTACAAAG CAAAATTTCA 
AATTGGAAAA ATGACTTATT CTTACCTGAT GATGCTCTAA AATCTGCAAG TGATGCTGAC 
AGCAGTGAAT ATGCTGAATT TTATCAGCGC TATCATAAAC ATATGAAAGC ATACAATGCA 
TTGGATTTTG ATGATTTGAT TCTGATCCCG ACACTGTTAA TGAAAAACTA TCCTGAAGTG 
CGTGAGCGTT GGCAGAACAA AATTCGTTAT TTATTGGTGG ATGAATATCA GGATACTAAC 
GCTAGCCAAT ATGAATTAGT TAAGAATATT ACTGGTGAGC GTGGTCGTTT AACCGTAGTA 
GGCGATGACG ATCAGTCTAT TTATTCATGG CGTGGTGCTA AACCAGAGAA TTTAATACTG 
CTTGGTAAAG ACTTTCCCGC GTTAAAATTA ATTAAACTTG AGCAAAATTA CCGTTCGAGT 
GGTCGTATCT TAAAATGCGC CAATGTTCTG ATTGCCAATA ACCCGCATGT GTATGACAAA 
GCATTATTTA GTGAACTTGC CTACGGTGTA GAACTTAGAG TAATACAAGC GAAAAATGAA 
GAAAATGAAA TTGAGCGTGT TATAGGCGAA CTCATTGGTC ATCGCTTTAT GAACCGCAGT 
CAATATAAAG ATTACGCGGT ACTTTATCGT GGTAATCACC AATCACGTTT ACTTGAAAAA 
GCACTGATGC AAAACCGTAT CCCTTATAAA ATCAGTGGTG GTACTTCGTT TTTTTCCCGT 
CCAGAAATAA AAGATGTCAT GGCCTATTTG CGGGTACTGG TTAACCCTGA CGATGACAAT 
GCTTTCTTAC GTATTGTGAA TGTGCCTAAA CGTGAATTAG GCCCAGCGAC GTTAGAGAAA 
TTAGGCACCT ACGCCAACAT GCGCCAAATT AGTATGTTTG CTGCCAGTTT TGAACTTGGT 
TTAGAACAAA CCTTAACCGG TCGCAGCTTA ATGAAAATGC AAGCATTTAC ACAATGGGTT 
GTTGATATTG CTGATCAGGC CGAACGAGGT GATACTGCCG CAGTATTACG CTCCATGATC 
CGTCAAATTA ATTACGAAGA CTTCCTATAC GATACCTCGA TGAGTGCTAA AGCAGCCGAG 
ATGCGTATGA AAAATGTCAC CGAGCTCTTT AGCTGGGTTA CACAAATGCT TGAAGGTAGT 
GATGACGAAG AGCCGATGAC CTTACCGCAA ATTGTTACTC GTTTAACCTT GCGCGATATG 
ATGGAACGAA ATGAAGAAGA GGACAGTAAC GATCAAGTTC AATTGATGAC ACTGCATGCT 
TCTAAAGGCC TCGAGTTTCC CTATGTATTC TTAATTGGTA TGGAAGAAGG TTTATTACCC 
CATCAAACCA GTATTGATGA AGGCAGTGTT GAAGAAGAGC GTCGCCTTGC TTATGTTGGT 
ATTACTCGCG CTCAGCGTGA ATTAATTTTT ACTTACGCTA GAGAGCGCAG GCAATTTGGT 
GAATTGTCTC GTACTGAAGC TAGTAGATTT TTACATGAAT TACCCCAAGA TGACTTAAAT 
TGGGAATTGG GCGCCGCAAA GAAGAAAACC GTTGAGCACG TTGAGAAATC AAATCAACAA 
GGCATGGCAG GTTTACGTGC CCAACTCGCT AAAGCTAAAG AAGCGAAAAA ATAA 

 

Protein sequence

MKLNPGQNEA VKFVSGPCLV LAGAGSGKTG VICQKIAYLI QKCDYKARNI AAVTFTNKAA 
REMKERIQKM LGRDLTRGLT VSTFHSLGLD IVRREIKILG YKPGFTLFDD QDSLALLKEL 
TIDELDGDKD LLSKLQSKIS NWKNDLFLPD DALKSASDAD SSEYAEFYQR YHKHMKAYNA 
LDFDDLILIP TLLMKNYPEV RERWQNKIRY LLVDEYQDTN ASQYELVKNI TGERGRLTVV 
GDDDQSIYSW RGAKPENLIL LGKDFPALKL IKLEQNYRSS GRILKCANVL IANNPHVYDK 
ALFSELAYGV ELRVIQAKNE ENEIERVIGE LIGHRFMNRS QYKDYAVLYR GNHQSRLLEK 
ALMQNRIPYK ISGGTSFFSR PEIKDVMAYL RVLVNPDDDN AFLRIVNVPK RELGPATLEK 
LGTYANMRQI SMFAASFELG LEQTLTGRSL MKMQAFTQWV VDIADQAERG DTAAVLRSMI 
RQINYEDFLY DTSMSAKAAE MRMKNVTELF SWVTQMLEGS DDEEPMTLPQ IVTRLTLRDM 
MERNEEEDSN DQVQLMTLHA SKGLEFPYVF LIGMEEGLLP HQTSIDEGSV EEERRLAYVG 
ITRAQRELIF TYARERRQFG ELSRTEASRF LHELPQDDLN WELGAAKKKT VEHVEKSNQQ 
GMAGLRAQLA KAKEAKK