| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0289 |
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| Symbol | |
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| ID | 3520567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 299631 |
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| End bp | 300767 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637282754 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_267055 |
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| Protein GI | 71280104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.904783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAA CTAAATGGCT TTTAGTGATT ATCATATTAG CTGGCACGAT TTTTGGCTTA
TATAGCTACA AAACATCGCT ACAACAAGCG GCAAATGAGC AAGCAGCGAG TATGCCTGAG
ATGGCAGCCA CAGTCACGGC AGTGAAAGTA GCTAATATTA GCTACCAAAA ACGTATTAAA
GTCAGTGGTG AAGTACAAGC CTTCAAGTTT TTAATGCTCA ATAATGAACT AGCAGGTGAA
ATTATCCGTT TAAATGCAGC CTCTGGTCAG GTTGTGAATA AAGGACAACT ACTACTTGAG
TTAGACCATC GTGACGAAGA TGCTCGTTTA ATGGCCGCTA AAGCGACATT GACATTAAAT
CAACAAACGT TAGATCGTAA TATAAAGTTG CATAAAAACC GCGGAATTAG TGAAGAGCAA
GTAGATCAGG CTCGCGCTGC TGTACAAATA GCGAAAGCAA ATATATCCGT GATCGCCACA
GCTATAGATA AAAAAACATT AACCGCACCA TTTACCGCTA AAGTAGGCAT TCATACCTTA
GAAGTAGGAC AATATTTAGA TAAGAACAGT CAAGTACTTG AGCTTGTAGG GGTTAATGAT
TTCACTTGGA TTGACTTTAA TTTGCCACAA CTTTACCAAG AACTCGGTTT ATCTTCGACG
GTAAAAATTA GTCCTATCAG TCAAGATTCA GTGTTTGAAG CAAAAATTAT AGCTATCGAC
CCACAGTTAT CTCGCCTTTC ACGTCATTTA AAATATCGCG CGCAACTGCC CTCTGCAACA
TTAGCATTAA AACCAAATAC CTTGGTGTCG GTGATTGTGC CTATAGCGAA TAAAGCAACG
CTTGCTGTTG TACCTGATTT AGCGATAAAA CGTGATGCAT TAGGTAATTA TGTCTTTGTT
TTAGAAGCTG ATGAAGCAGG TAGCTATCGC GCTAAACAAG TTGCCGTTGA ATTGGGTGAA
CGACAAGGTG AACAGGTTAT GATCCTTGCT GGTGTCGAAG CAGGACAACT TATTGCTAAT
AAAGGCGCGT TCAAATTATT TCCAGGCATG AAAGTATACC TTGCTGATGC AACCGCGACC
GATGTAACCA AAGAAACAAC TCAAGCAGTA GTTTCTGATG CAAGCGCGCA AGATTAA
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| Protein sequence | MNITKWLLVI IILAGTIFGL YSYKTSLQQA ANEQAASMPE MAATVTAVKV ANISYQKRIK
VSGEVQAFKF LMLNNELAGE IIRLNAASGQ VVNKGQLLLE LDHRDEDARL MAAKATLTLN
QQTLDRNIKL HKNRGISEEQ VDQARAAVQI AKANISVIAT AIDKKTLTAP FTAKVGIHTL
EVGQYLDKNS QVLELVGVND FTWIDFNLPQ LYQELGLSST VKISPISQDS VFEAKIIAID
PQLSRLSRHL KYRAQLPSAT LALKPNTLVS VIVPIANKAT LAVVPDLAIK RDALGNYVFV
LEADEAGSYR AKQVAVELGE RQGEQVMILA GVEAGQLIAN KGAFKLFPGM KVYLADATAT
DVTKETTQAV VSDASAQD
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