| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0285 |
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| Symbol | |
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| ID | 3522724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 291797 |
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| End bp | 293602 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637282750 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_267051 |
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| Protein GI | 71282251 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.451102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACC AACCTGCTGC AAGTGATCTA GCAGAGAATG CTTCAATTGA TACTGCTGAA
AAGAAAAAGA TCTCCATTCT TCTTGAGCTC ATTCAGTTTA TTCGCCCTTA TAAAAGTCAG
GTATTAGCCG CCTTTATTGC CCTTATTTTT ACCGCAGGTG TGATGCTATC TGTTGGTCAA
GGCGTGAGAA TGCTCATTGA TGAGGGCTTT GCTCAACAAT CTATAGAGCA ATTACAGCAA
GCAGTACTAT TTATATTGGC TATTACGGTG TTAATTGCTG GGGGGACATT TTTCCGTTTC
TACTTGGTTT CTTGGTTAGG TGAACGAGTA AGCGCTGATA TCCGCTTGGC CGTTTTTAAT
CATGTCATCA CCTTACATCC CAGCTATTTC GAGACTAACG GCAGCGGCGA TATTATGTCG
CGAATTACCA CCGATACTAC CTTACTACAA AGCATTATTG GTTCTTCGTT TTCTATGGCC
ATCCGTAGTG TACTCATGCT ATTAGGTGCT TTAGTTATGC TATTTGCTAC CAATATCAAA
TTAACTTTTA TTGTTTTGCT GTCGGTACCT TTTATTTTAG TACCGATATT GTTTTATGGT
CGTAAAGTCA GAAAATTATC GCGTAAAAGC CAAGATTCAA TGGCCGATGT TGGTAGTTAT
GCTGGTGAGG CAATTGAGCA TATTAAAACA GTACAAAGTT ATACCCACGA ACAGCATGAA
AGACGCTCCT TTGGCAAGGA AGTTGAAAAG TCATTTAACA TTGGTCGCAA CCGTATAAAG
CAGCGTGCCA CATTAATTGC TGGCGTTATT ATCATTGTTT TTGGTGCAAT TACTGGCATG
TTATGGGTCG GTGGTAGCGA TGTCATTCAA GGTAAGATGA GCGGTGGTGA TTTAGGTGCT
TTTGTCTTTT ATGCCATTTT GGTCGCTTCT TCGTTAGCCA CGATTTCAGA AGTATTAGGC
GAGTTACAAC GTGCTGCGGG TGCTACCGAA AGATTAATAG AGATATTACA GGTTGAAAGC
CATATTCTTC CTCCTGTTGA AAATGCTATT TCAGCGAAAG ATCTCAACGC GCAAATTGTT
TTTGAAGCAG TCAGTTTTAA TTACCCTTCT CGACCCGATC AAGCCGCAAC GCAAGCACTG
AACTTAACCG CTCAACAAGG TAAAGTATTA GCGCTAGTGG GTCCGTCTGG CGCTGGGAAA
ACGACACTAT TTGAATTATT ACAGCGTTTT TATGACCCAC AAGTTGGTCG TATTACCTTA
GGTGGTACCG ATATAAGACA GCTTGATCCG AAAGATCTTC GTCAACAAAT GGCTTTAGTA
CCGCAACAAC CCGCTCTATT TAGTAGTGAC GTTTTTCATA ATATTCGTTA CGGCAAACCT
GAGGCTAGTG ATGAAGAAGT TATTTCAGCA GCTAAAAAAG CCCATGCTCA TGAGTTTATT
GTCAACTTAC CTGAAGGTTA TAACAGCTTT TTAGGTGAAC GTGGTGTGCG CTTATCGGGC
GGTCAACGCC AACGTATTGC TATTGCACGT GCAATATTAA AAGACCCACA TATTTTGCTA
TTAGATGAGG CGACCAGTGC CCTTGATAGT GAAAGCGAAC AGCACGTGCA ACAAGCATTA
GAAGAGTTAA TGCGTGGTCG CACAACAATT ATCATTGCCC ACCGACTATC GACAATTCAA
CACGCGGATA AGATTGCAGT GTTAGAACAA GGTCGAATAA TCGATATGGG CGATCACCAG
TCGCTATTGC AAAACTGCGA GTTGTATCAA AGATTGGTGG AATTACAGTT CAAAAAGCTT
GGCTAG
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| Protein sequence | MSDQPAASDL AENASIDTAE KKKISILLEL IQFIRPYKSQ VLAAFIALIF TAGVMLSVGQ
GVRMLIDEGF AQQSIEQLQQ AVLFILAITV LIAGGTFFRF YLVSWLGERV SADIRLAVFN
HVITLHPSYF ETNGSGDIMS RITTDTTLLQ SIIGSSFSMA IRSVLMLLGA LVMLFATNIK
LTFIVLLSVP FILVPILFYG RKVRKLSRKS QDSMADVGSY AGEAIEHIKT VQSYTHEQHE
RRSFGKEVEK SFNIGRNRIK QRATLIAGVI IIVFGAITGM LWVGGSDVIQ GKMSGGDLGA
FVFYAILVAS SLATISEVLG ELQRAAGATE RLIEILQVES HILPPVENAI SAKDLNAQIV
FEAVSFNYPS RPDQAATQAL NLTAQQGKVL ALVGPSGAGK TTLFELLQRF YDPQVGRITL
GGTDIRQLDP KDLRQQMALV PQQPALFSSD VFHNIRYGKP EASDEEVISA AKKAHAHEFI
VNLPEGYNSF LGERGVRLSG GQRQRIAIAR AILKDPHILL LDEATSALDS ESEQHVQQAL
EELMRGRTTI IIAHRLSTIQ HADKIAVLEQ GRIIDMGDHQ SLLQNCELYQ RLVELQFKKL
G
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