Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0263 |
Symbol | |
ID | 3522177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 266257 |
End bp | 267888 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282729 |
Product | putative iron-regulated membrane protein |
Protein accession | YP_267030 |
Protein GI | 71281705 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.730066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA ACTTTAGACA GTCGATGAAG TGGTTCCATA CTTGGGTCGG CCTGAGTGTC GGCTGGATTT TATTTTTCAT GTTTTTAACT GGAACACTTG GTTATTTTTA CCAAGAAATT ACCCGTTGGA TGGAGCCAGA GCGACCATTC ATTCAACATA ATATTAGCAC TGAACAGTTA ATTACTATTG CCCAAACGTA CTTGCAAAAA AATGCTCAGG GCGTTGATGA ATGGGATATT AATTTACCGA CTGTTCGCAA TCAAAATTTA CGAGTGGGCT GGCGTAATCC GTCAGAAGCG GGGAAGAAGC GTGGTCGGTA TAAGACAACA GTGTTAGATA TAACCACAGG CGAAAAAGTC GAGAGCCGAG CAACTGGTGG CGGTAGGCTG CTTTACAGAA TGCATTATCG TTTACATTAT TTATCAACTA AAATTAGCTA TTGGATCGTG GGTTTCTGCG CCATGCTGAT GTTATTAGCC GTTATCACCG GTGTCGTTAT TCATAAGAAA ATCTTCACTG ATTTTTTTAC CTTTAGAGCA AAAAAAGGTT TGATTGGCTG GTTAGATATT CACAATGTAT TAAGTGTTAT TGCCTTGCCA TTTCACTTTA TGATTACCTA CAGTGGTTTA CTTTTTTTCC TTTTTACTTA CATGGCGCTC AGTACTAATC TGCAAACCAA TGAAGATGAA TATCGGGAAA TGCGTAAAGA GATATACCCT CGAACTAGTC ATGCAGATAG TGCGAATCAA CCTGCAGAAA TGCAAGATAT TGCATCGTTA TATCAACAAG CAAAAAATAC GTGGAAAAAT GATGAACTCA ACGCGGTTGA AGTGTTTGCT GCAAACGATA TAAATGCCCA ATTCCTTTTT ATTCGTCATG AAACCGATAT CACTTATAAC CCTAATGACC AAGTAATGGT TAACGCAATT ACCGGTGAAG TCATTCAACA AACACCGAGA GAGTATACTG CCGCCGGTAT GATTCATAAT GGTTTTTACT CATTGCATGA GGGACAATTT GCGGGACCAC TAGCCCGTTG GATTTACTTT TTAACCGGTC TTATTGGCAC CGCAATGATT GCTTCAGGTT TAATTCTTTG GACCACTAAA CGTAAACCGA AACAACTGAA AAAACCGGAC GGCCCCGATT TTGGTTACCG ACTAGTTGAG CAACTCAATA TTGGTACTAT TGTTGGTTTA CCTATCGCTA TCGCTATGTA TTTTTATGCT AATAGGTTAT TACCTGTCGG TATGGTTGAT CGAGTAGATT GGGAAGCTAA TGTGATGTTT ATCAGTTGGG CACTATTACT AATTTATCCT GCGTTTCGTT CGCCTACTAG AGCATGGCTT GAGCAGCTAC AACTTGCAGC ACTGGTTTAT ATGGCGCTTC CGTTGGTAAA TGCATTAACC ACAGATAAAC ACCTAGTTAA TAGTTTGCAA CAACAGGATT GGGGCCTAGC TGCTTTTGAT CTGACATTCT TCACCGTTGG TTGTTGTTTT GCTTTTTCGG CCTATAAATA CAAAACACTG CAGCCTGAAA AAGCAATGAG CAGAAAAGCA ATTCGGCAAG ACAGTGCAAT AGATAATGAA AGTCGACTGC AGTTACAGTG CATTAGTAAG GAGAATGGCT AA
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Protein sequence | MKDNFRQSMK WFHTWVGLSV GWILFFMFLT GTLGYFYQEI TRWMEPERPF IQHNISTEQL ITIAQTYLQK NAQGVDEWDI NLPTVRNQNL RVGWRNPSEA GKKRGRYKTT VLDITTGEKV ESRATGGGRL LYRMHYRLHY LSTKISYWIV GFCAMLMLLA VITGVVIHKK IFTDFFTFRA KKGLIGWLDI HNVLSVIALP FHFMITYSGL LFFLFTYMAL STNLQTNEDE YREMRKEIYP RTSHADSANQ PAEMQDIASL YQQAKNTWKN DELNAVEVFA ANDINAQFLF IRHETDITYN PNDQVMVNAI TGEVIQQTPR EYTAAGMIHN GFYSLHEGQF AGPLARWIYF LTGLIGTAMI ASGLILWTTK RKPKQLKKPD GPDFGYRLVE QLNIGTIVGL PIAIAMYFYA NRLLPVGMVD RVDWEANVMF ISWALLLIYP AFRSPTRAWL EQLQLAALVY MALPLVNALT TDKHLVNSLQ QQDWGLAAFD LTFFTVGCCF AFSAYKYKTL QPEKAMSRKA IRQDSAIDNE SRLQLQCISK ENG
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