Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0261 |
Symbol | gph |
ID | 3519951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 265002 |
End bp | 265682 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637282727 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_267028 |
Protein GI | 71279492 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACTGC AAGAAAAAGA AGTACTCTTA TTCGATCTCG ATGGCACCTT AGTAGACAGT GCCCCTGATC TTGCTTTAGC CGTAAATAGA ACCCTTAAAG ATTTAAACAA AGCGACCTTC GATCAAGACA CTATTCACCA TTGGGTGGGT AATGGTGCCA AAGTATTAAT TGAACGAGCA TTATCGGGTT CTGCAATCAT TGATAAAGAA TTAGATGAAA CGCTCACTAA AGATGCGCTA ACCATTTTTC TAGCCCATTA CCAGCAGTGC TTATGCATAG AATCAGTATT GTATGACGAT GTGCAAGAAG GGTTGCTTTC ATTAAAAGCG GCTGGCTTTC GTCTTGCGAT TATTACCAAT AAACCTGCTA TTTTCATTCA ACCGATATTA ACGGGCTTAG GTATTGATAA CCTGTTTGAG TTATTAATTG GTGGTGATAC GTTAGCGGAT AAAAAACCAC ATCCAGCACC ATTACATTAT GCCATGAAGC AACTTAACGT TGTTGCTGAG CAGTGTGTGA TGATCGGAGA TTCTAAAAAC GATATCTTAG CTGCAAAAGC AGCCAACATA GATAGTGTTG GCTTAACTTA CGGTTATAAC TACGGTGAAG ACATCAATCA ATATGGCCCG CAGTGGTGCT TTGATACTTT CAATGAACTA CTGATTTCGT TAAAGCGTTA A
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Protein sequence | MKLQEKEVLL FDLDGTLVDS APDLALAVNR TLKDLNKATF DQDTIHHWVG NGAKVLIERA LSGSAIIDKE LDETLTKDAL TIFLAHYQQC LCIESVLYDD VQEGLLSLKA AGFRLAIITN KPAIFIQPIL TGLGIDNLFE LLIGGDTLAD KKPHPAPLHY AMKQLNVVAE QCVMIGDSKN DILAAKAANI DSVGLTYGYN YGEDINQYGP QWCFDTFNEL LISLKR
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