Gene CPS_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0261 
Symbolgph 
ID3519951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp265002 
End bp265682 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content40% 
IMG OID637282727 
Productphosphoglycolate phosphatase 
Protein accessionYP_267028 
Protein GI71279492 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTGC AAGAAAAAGA AGTACTCTTA TTCGATCTCG ATGGCACCTT AGTAGACAGT 
GCCCCTGATC TTGCTTTAGC CGTAAATAGA ACCCTTAAAG ATTTAAACAA AGCGACCTTC
GATCAAGACA CTATTCACCA TTGGGTGGGT AATGGTGCCA AAGTATTAAT TGAACGAGCA
TTATCGGGTT CTGCAATCAT TGATAAAGAA TTAGATGAAA CGCTCACTAA AGATGCGCTA
ACCATTTTTC TAGCCCATTA CCAGCAGTGC TTATGCATAG AATCAGTATT GTATGACGAT
GTGCAAGAAG GGTTGCTTTC ATTAAAAGCG GCTGGCTTTC GTCTTGCGAT TATTACCAAT
AAACCTGCTA TTTTCATTCA ACCGATATTA ACGGGCTTAG GTATTGATAA CCTGTTTGAG
TTATTAATTG GTGGTGATAC GTTAGCGGAT AAAAAACCAC ATCCAGCACC ATTACATTAT
GCCATGAAGC AACTTAACGT TGTTGCTGAG CAGTGTGTGA TGATCGGAGA TTCTAAAAAC
GATATCTTAG CTGCAAAAGC AGCCAACATA GATAGTGTTG GCTTAACTTA CGGTTATAAC
TACGGTGAAG ACATCAATCA ATATGGCCCG CAGTGGTGCT TTGATACTTT CAATGAACTA
CTGATTTCGT TAAAGCGTTA A
 
Protein sequence
MKLQEKEVLL FDLDGTLVDS APDLALAVNR TLKDLNKATF DQDTIHHWVG NGAKVLIERA 
LSGSAIIDKE LDETLTKDAL TIFLAHYQQC LCIESVLYDD VQEGLLSLKA AGFRLAIITN
KPAIFIQPIL TGLGIDNLFE LLIGGDTLAD KKPHPAPLHY AMKQLNVVAE QCVMIGDSKN
DILAAKAANI DSVGLTYGYN YGEDINQYGP QWCFDTFNEL LISLKR